RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 THBS3P49746 956 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 LINC00205P59089 165 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 PAX8Q06710 450 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 CD300CQ08708 224 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 HCP5Q6MZN7 132 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 SPAG16Q8N0X2 631 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 IL22RA2Q969J5 263 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 FOXC2Q99958 501 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 FAM212BQ9NTI7 297 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-213ENST00000565834 PRELID3BQ9Y3B1 194 aa15.25■□□□□ 0.03
COMMD4-213ENST00000565834 CREBBPQ92793 2442 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 PIGBOS1A0A0B4J2F0 54 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 FAM25EA8MYX2 175 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 BUB1B-PAK6H3BSN5 160 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 H2BFSP57053 126 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 DCAF12L2Q5VW00 463 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 SELENOHQ8IZQ5 122 aaKnown RBP15.24■□□□□ 0.03
COMMD4-213ENST00000565834 LINC01356Q8N9X3 169 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 OR4P4Q8NGL7 312 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 CD300LFQ8TDQ1 290 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 RBPMSQ93062 196 aaKnown RBP15.24■□□□□ 0.03
COMMD4-213ENST00000565834 ST6GALNAC6Q969X2 333 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 C18orf12Q96KH6 178 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 TBX15Q96SF7 602 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 CHIAQ9BZP6 476 aa15.24■□□□□ 0.03
COMMD4-213ENST00000565834 TRAV20A0A0B4J274 112 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 RNASEK-C17orf49H0YIS7 233 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 IFNA21P01568 189 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 RPA2P15927 270 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 KIR2DS2P43631 304 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 ZNF585BQ52M93 769 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 LYZL2Q7Z4W2 148 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 SLC35G3Q8N808 338 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 MAPK1IP1LQ8NDC0 245 aa15.23■□□□□ 0.03
COMMD4-213ENST00000565834 FYTTD1Q96QD9 318 aaKnown RBP15.23■□□□□ 0.03
COMMD4-213ENST00000565834 DUXBA0A1W2PPF3 345 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 C5orf51A6NDU8 294 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 ODF3BA8MYP8 253 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 RAMP3O60896 148 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 FCGR3BO75015 233 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 GIPP09681 153 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-213ENST00000565834 CT45A6P0DMU7 189 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 CT45A5P0DMU8 189 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 CT45A7P0DMV0 189 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 LPAR6P43657 344 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 REG1BP48304 166 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 BRWD1-AS2P59051 145 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 GSG1LQ6UXU4 331 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 TGIF2LXQ8IUE1 241 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 PDZD9Q8IXQ8 264 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 ZNF383Q8NA42 475 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 ZBTB8BQ8NAP8 495 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-213ENST00000565834 DDB2Q92466 427 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 PDCD10Q9BUL8 212 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 MRPL20Q9BYC9 149 aaKnown RBP15.22■□□□□ 0.03
COMMD4-213ENST00000565834 C13orf42A0A1B0GVH6 325 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 OR2A4O95047 310 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 HTR1DP28221 377 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 ZNF816Q0VGE8 651 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-213ENST00000565834 DIAPH2-AS1Q14236 149 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 GGNBP1Q5YKI7 109 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 WFDC11Q8NEX6 87 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 LHX4Q969G2 390 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 OR2A7Q96R45 310 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 HIF1ANQ9NWT6 349 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 TMED3Q9Y3Q3 217 aa15.22■□□□□ 0.03
COMMD4-213ENST00000565834 BOLA2-SMG1P6H3BVE0 249 aa15.21■□□□□ 0.03
COMMD4-213ENST00000565834 RBFOX2O43251 390 aaKnown RBP eCLIP15.21■□□□□ 0.03
COMMD4-213ENST00000565834 IGKV1-39P01597 117 aa15.21■□□□□ 0.03
COMMD4-213ENST00000565834 IGKV1D-39P04432 117 aa15.21■□□□□ 0.03
COMMD4-213ENST00000565834 GATA3P23771 443 aa15.21■□□□□ 0.03
COMMD4-213ENST00000565834 TCTE3Q8IZS6 198 aa15.21■□□□□ 0.03
COMMD4-213ENST00000565834 FAM210AQ96ND0 272 aa15.21■□□□□ 0.03
COMMD4-213ENST00000565834 ITGB1BP2Q9UKP3 347 aa15.21■□□□□ 0.03
COMMD4-213ENST00000565834 PAIP2BQ9ULR5 123 aaKnown RBP15.21■□□□□ 0.03
COMMD4-213ENST00000565834 ITPR3Q14573 2671 aa15.21■□□□□ 0.02
COMMD4-213ENST00000565834 A0A1W2PRD5 423 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 A0A1W2PRF3 423 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 A0A1W2PRM7 423 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 LEUTXA8MZ59 168 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 CEACAM3P40198 252 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 UBE2E1P51965 193 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 RAP2BP61225 183 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 TMEM249Q2WGJ8 235 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 OR4S2Q8NH73 311 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 ASB13Q8WXK3 278 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 RPEQ96AT9 228 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 SEC22AQ96IW7 307 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 NABP2Q9BQ15 211 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 DPM3Q9P2X0 92 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 AUP1Q9Y679 476 aa15.2■□□□□ 0.02
COMMD4-213ENST00000565834 SETXQ7Z333 2677 aaKnown RBP15.19■□□□□ 0.02
COMMD4-213ENST00000565834 CSMD1Q96PZ7 3565 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 MPTX1A8MV57 137 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 LY6LH3BQJ8 138 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 TXNL1O43396 289 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 S1PR2O95136 353 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 APOA2P02652 100 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 GAPDHP04406 335 aaKnown RBP15.19■□□□□ 0.02
COMMD4-213ENST00000565834 VDAC1P21796 283 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms