RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 SPDEFO95238 335 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 IGKV1-16P04430 117 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 IGLL1P15814 213 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 CDX1P47902 265 aaPredicted RBP13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 LSM3P62310 102 aaKnown RBP13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 CX3CL1P78423 397 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 TAGLNQ01995 201 aaKnown RBP13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 CBX3Q13185 183 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 PSG5Q15238 335 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 CNIH2Q6PI25 160 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 TMEM65Q6PI78 240 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 LCNL1Q6ZST4 164 aa13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 MRPL41Q8IXM3 137 aaKnown RBP13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 RCC1LQ96I51 464 aaKnown RBP13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 METTL1Q9UBP6 276 aaKnown RBP13.55□□□□□ -0.24
AC105339.3-201ENST00000560043 FCN1O00602 326 aa13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 DUS4LO95620 317 aaKnown RBP13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 PSMB8P28062 276 aa13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 PPIFP30405 207 aaKnown RBP13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 TGFBR1P36897 503 aa13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 RPS19P39019 145 aaKnown RBP13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 ABHD5Q8WTS1 349 aa13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 ADTRPQ96IZ2 230 aa13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 ANXA10Q9UJ72 324 aa13.54□□□□□ -0.24
AC105339.3-201ENST00000560043 LGALS7P47929 136 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 LUMP51884 338 aaPredicted RBP13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 CRIP2P52943 208 aaPredicted RBP13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 TMEM267Q0VDI3 215 aaPredicted RBP13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 RTL8BQ17RB0 113 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 REC114Q7Z4M0 266 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 C5orf30Q96GV9 206 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 CLCC1Q96S66 551 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 P2RX4Q99571 388 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 AUNIPQ9H7T9 357 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 NECAP2Q9NVZ3 263 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 OR2W1Q9Y3N9 320 aa13.53□□□□□ -0.24
AC105339.3-201ENST00000560043 J3QRK9 145 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 CCL24O00175 119 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 SLC25A17O43808 307 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 IGLV1-40P01703 118 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 RRASP10301 218 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 NFYAP23511 347 aaPredicted RBP13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 NDPQ00604 133 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 ECSCRQ19T08 205 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 ZNF562Q6V9R5 426 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 MINDY2Q8NBR6 621 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 BVESQ8NE79 360 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 S100A16Q96FQ6 103 aaKnown RBP13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 RAX2Q96IS3 184 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 FUNDC2Q9BWH2 189 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 GPR61Q9BZJ8 451 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 FBXO7Q9Y3I1 522 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 NUBP2Q9Y5Y2 271 aa13.52□□□□□ -0.25
AC105339.3-201ENST00000560043 SLC22A5O76082 557 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 HLA-DQB1P01920 261 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 PRB2P02812 416 aaPredicted RBP13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 DUTP33316 252 aaKnown RBP13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 ARPC4P59998 168 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 TMEM177Q53S58 311 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 UBE2NLQ5JXB2 153 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 FOXB2Q5VYV0 432 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 PPP1R27Q86WC6 154 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 HOGA1Q86XE5 327 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 ZNF645Q8N7E2 425 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 TCTEX1D1Q8N7M0 179 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 BEST4Q8NFU0 473 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 MYOZ3Q8TDC0 251 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 DUX3Q96PT4 197 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 MCRIP2Q9BUT9 160 aaKnown RBP13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 KLK15Q9H2R5 256 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 FOXA2Q9Y261 457 aaPredicted RBP13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 A3GALT2U3KPV4 340 aa13.51□□□□□ -0.25
AC105339.3-201ENST00000560043 SHOXO15266 292 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 XRCC3O43542 346 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 CA2P00918 260 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 EGR2P11161 476 aaPredicted RBP13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 CBX5P45973 191 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 C19orf54Q5BKX5 351 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 SAMD12Q8N8I0 201 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 ZNF491Q8N8L2 437 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 OR13F1Q8NGS4 319 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 SLC25A46Q96AG3 418 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 KCTD12Q96CX2 325 aaKnown RBP13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 UBE2E2Q96LR5 201 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 HARBI1Q96MB7 349 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 VSIG4Q9Y279 399 aa13.5□□□□□ -0.25
AC105339.3-201ENST00000560043 A0A1W2PN81 502 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 IGLV2-23P01705 113 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 CHRNA7P36544 502 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 RAB9AP51151 201 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 KIAA0141Q14154 515 aaPredicted RBP13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 FXYD3Q14802 87 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 AKIRIN2Q53H80 203 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 UNQ5815/PRO19632Q6UWF5 114 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 GVQW1Q8N7I0 195 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 DDB2Q92466 427 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 ARPC1AQ92747 370 aa13.49□□□□□ -0.25
AC105339.3-201ENST00000560043 TPSG1Q9NRR2 321 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms