RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 IGKV1-16P04430 117 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 FXYD4P59646 89 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 TMEM177Q53S58 311 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 NMSQ5H8A3 153 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 LYG2Q86SG7 212 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 WDR89Q96FK6 387 aaPredicted RBP5.41□□□□□ -1.54
LINC00517-202ENST00000554257 SEC22CQ9BRL7 303 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 C7orf69Q9H7B7 122 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 PRR13Q9NZ81 148 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 GNG12Q9UBI6 72 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 SHPKQ9UHJ6 478 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 MED13LQ71F56 2210 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 TRAV6A0A075B6T7 132 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 CGB1A6NKQ9 187 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 OOSP1A8MZH6 123 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 NDUFA3O95167 84 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 TGFAP01135 160 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 AMY1AP04745 511 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 RLN1P04808 185 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 FGF2P09038 288 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 BPIFB3P59826 476 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 AANATQ16613 207 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 TATDN3Q17R31 274 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 FAM120AOSQ5T036 256 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 LPCAT3Q6P1A2 487 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 TMEM17Q86X19 198 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 THNSL2Q86YJ6 484 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 SELENOHQ8IZQ5 122 aaKnown RBP5.41□□□□□ -1.54
LINC00517-202ENST00000554257 ZFAND1Q8TCF1 268 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 MALSU1Q96EH3 234 aa5.41□□□□□ -1.54
LINC00517-202ENST00000554257 HSD17B10Q99714 261 aaKnown RBP5.41□□□□□ -1.54
LINC00517-202ENST00000554257 GSX1Q9H4S2 264 aaPredicted RBP5.41□□□□□ -1.54
LINC00517-202ENST00000554257 FAM240BA0A1B0GVZ2 78 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 A0A1B0GW64 132 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 SNRPGP15A8MWD9 76 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 PITX3O75364 302 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 OR5AC1P0C628 307 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 COX7A1P24310 79 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 DEFA1P59665 94 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 DEFA3P59666 94 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 PHLDA2Q53GA4 152 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 C19orf54Q5BKX5 351 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 NPBQ8NG41 125 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 OR11H7Q8NGC8 314 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 IL22RA2Q969J5 263 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 HEXA-AS1Q9H8Q6 139 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 C3orf85A0A1B0GTC6 90 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 MDFIC2A0A1B0GVS7 189 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 CENPXA8MT69 81 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 MPTX1A8MV57 137 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 A8MV72 311 aaPredicted RBP5.4□□□□□ -1.54
LINC00517-202ENST00000554257 SMAD7O15105 426 aaKnown RBP5.4□□□□□ -1.54
LINC00517-202ENST00000554257 TNFSF12O43508 249 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 B3GALNT1O75752 331 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 VENTXO95231 258 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 DUS4LO95620 317 aaKnown RBP5.4□□□□□ -1.54
LINC00517-202ENST00000554257 SULT1A3P0DMM9 295 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 SULT1A4P0DMN0 295 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 GPR12P47775 334 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 PRRX1P54821 245 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 BRD3OSQ6XYD6 125 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 Q6YL49 198 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 LYG1Q8N1E2 194 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 TCTEX1D1Q8N7M0 179 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 TOMM40LQ969M1 308 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 DPM3Q9P2X0 92 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 NUP50Q9UKX7 468 aa5.4□□□□□ -1.54
LINC00517-202ENST00000554257 TXNL1O43396 289 aa5.4□□□□□ -1.55
LINC00517-202ENST00000554257 IFNA6P05013 189 aa5.4□□□□□ -1.55
LINC00517-202ENST00000554257 TSPAN5P62079 268 aa5.4□□□□□ -1.55
LINC00517-202ENST00000554257 Q6ZRM9 215 aa5.4□□□□□ -1.55
LINC00517-202ENST00000554257 FAM71E2Q8N5Q1 922 aa5.4□□□□□ -1.55
LINC00517-202ENST00000554257 ZNF431Q8TF32 576 aaPredicted RBP5.4□□□□□ -1.55
LINC00517-202ENST00000554257 A6NDX4 124 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 LEUTXA8MZ59 168 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 INMT-MINDY4F8WBC2 141 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 PRAF2O60831 178 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 CNTFRP26992 372 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 HTR1DP28221 377 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 CD1BP29016 333 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 THBS3P49746 956 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 TAS2R31P59538 309 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 HERV-K104P61576 105 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 KLK9Q2XQG4 91 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 LIAT1Q6ZQX7 453 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 PDZD9Q8IXQ8 264 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 OR8H3Q8N146 312 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 ENKURQ8TC29 256 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 KLK9Q9UKQ9 250 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 AMMECR1Q9Y4X0 333 aaPredicted RBP5.39□□□□□ -1.55
LINC00517-202ENST00000554257 ABCA1O95477 2261 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 NF1P21359 2839 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 hCG_1809904A0A1W2PP81 198 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 A0A1W2PPE2 198 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 A0A1W2PR64 198 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 A0A1W2PRV1 198 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 TIMM23O14925 209 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 S1PR2O95136 353 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 IER3P46695 156 aa5.39□□□□□ -1.55
LINC00517-202ENST00000554257 H2BFSP57053 126 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms