RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 LSM3P62310 102 aaKnown RBP16.1■□□□□ 0.17
HIF1A-206ENST00000553999 KCTD21Q4G0X4 260 aa16.1■□□□□ 0.17
HIF1A-206ENST00000553999 REC114Q7Z4M0 266 aa16.1■□□□□ 0.17
HIF1A-206ENST00000553999 TPRA1Q86W33 373 aa16.1■□□□□ 0.17
HIF1A-206ENST00000553999 GRPEL2Q8TAA5 225 aa16.1■□□□□ 0.17
HIF1A-206ENST00000553999 ALX4Q9H161 411 aaPredicted RBP16.1■□□□□ 0.17
HIF1A-206ENST00000553999 PRKDCP78527 4128 aaKnown RBP16.1■□□□□ 0.17
HIF1A-206ENST00000553999 WI2-2373I1.2A0A1W2PRP0 233 aa16.09■□□□□ 0.17
HIF1A-206ENST00000553999 CDX1P47902 265 aaPredicted RBP16.09■□□□□ 0.17
HIF1A-206ENST00000553999 GNG2P59768 71 aa16.09■□□□□ 0.17
HIF1A-206ENST00000553999 BVESQ8NE79 360 aa16.09■□□□□ 0.17
HIF1A-206ENST00000553999 C4orf3Q8WVX3 66 aa16.09■□□□□ 0.17
HIF1A-206ENST00000553999 DPF1Q92782 380 aa16.09■□□□□ 0.17
HIF1A-206ENST00000553999 RHBDL2Q9NX52 303 aa16.09■□□□□ 0.17
HIF1A-206ENST00000553999 K7EIL1 84 aa16.08■□□□□ 0.16
HIF1A-206ENST00000553999 SOX15O60248 233 aa16.08■□□□□ 0.16
HIF1A-206ENST00000553999 RBBP9O75884 186 aa16.08■□□□□ 0.16
HIF1A-206ENST00000553999 NFYAP23511 347 aaPredicted RBP16.08■□□□□ 0.16
HIF1A-206ENST00000553999 PPIFP30405 207 aaKnown RBP16.08■□□□□ 0.16
HIF1A-206ENST00000553999 DEFB121Q5J5C9 76 aa16.08■□□□□ 0.16
HIF1A-206ENST00000553999 UNQ5815/PRO19632Q6UWF5 114 aa16.08■□□□□ 0.16
HIF1A-206ENST00000553999 PPP1R27Q86WC6 154 aa16.08■□□□□ 0.16
HIF1A-206ENST00000553999 FLYWCH2Q96CP2 140 aaKnown RBP16.08■□□□□ 0.16
HIF1A-206ENST00000553999 MS4A10Q96PG2 267 aa16.08■□□□□ 0.16
HIF1A-206ENST00000553999 SSX5O60225 188 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 DUS4LO95620 317 aaKnown RBP16.07■□□□□ 0.16
HIF1A-206ENST00000553999 PTHLHP12272 177 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 OR2B11Q5JQS5 317 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 HACD4Q5VWC8 232 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 PDPNQ86YL7 162 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 H1FOOQ8IZA3 346 aaPredicted RBP16.07■□□□□ 0.16
HIF1A-206ENST00000553999 RNF152Q8N8N0 203 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 OR11H1Q8NG94 326 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 SLC25A38Q96DW6 304 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 HARBI1Q96MB7 349 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 TSNAXQ99598 290 aaKnown RBP16.07■□□□□ 0.16
HIF1A-206ENST00000553999 GHITMQ9H3K2 345 aa16.07■□□□□ 0.16
HIF1A-206ENST00000553999 TRAV18A0A075B6X5 111 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 IGHV3-11P01762 117 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 EGR2P11161 476 aaPredicted RBP16.06■□□□□ 0.16
HIF1A-206ENST00000553999 DTYMKP23919 212 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 SLC6A1P30531 599 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 RAB9AP51151 201 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 DEFA5Q01523 94 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 PJVKQ0ZLH3 352 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 ZNF660Q6AZW8 331 aaPredicted RBP16.06■□□□□ 0.16
HIF1A-206ENST00000553999 ZNF491Q8N8L2 437 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.06■□□□□ 0.16
HIF1A-206ENST00000553999 LFNGQ8NES3 379 aa16.06■□□□□ 0.16
HIF1A-206ENST00000553999 FOXA2Q9Y261 457 aaPredicted RBP16.06■□□□□ 0.16
HIF1A-206ENST00000553999 IGLV1-40P01703 118 aa16.05■□□□□ 0.16
HIF1A-206ENST00000553999 APELAP0DMC3 54 aa16.05■□□□□ 0.16
HIF1A-206ENST00000553999 ZNF260Q3ZCT1 412 aa16.05■□□□□ 0.16
HIF1A-206ENST00000553999 TSPAN14Q8NG11 270 aa16.05■□□□□ 0.16
HIF1A-206ENST00000553999 OR5M8Q8NGP6 311 aa16.05■□□□□ 0.16
HIF1A-206ENST00000553999 ARPC1AQ92747 370 aa16.05■□□□□ 0.16
HIF1A-206ENST00000553999 VSIG4Q9Y279 399 aa16.05■□□□□ 0.16
HIF1A-206ENST00000553999 MEIS3P1A6NDR6 274 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 ARPC1BO15143 372 aaKnown RBP16.04■□□□□ 0.16
HIF1A-206ENST00000553999 SHOXO15266 292 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 CNIH1O95406 144 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 TAGLNQ01995 201 aaKnown RBP16.04■□□□□ 0.16
HIF1A-206ENST00000553999 KIAA0141Q14154 515 aaPredicted RBP16.04■□□□□ 0.16
HIF1A-206ENST00000553999 FXYD3Q14802 87 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 ARL6IP1Q15041 203 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 ACTBL2Q562R1 376 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 IDO2Q6ZQW0 420 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 MINDY2Q8NBR6 621 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 OR1N2Q8NGR9 330 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 MYOZ3Q8TDC0 251 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 MCRIP2Q9BUT9 160 aaKnown RBP16.04■□□□□ 0.16
HIF1A-206ENST00000553999 TOLLIPQ9H0E2 274 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 ZNF355PQ9NSJ1 428 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 ZNF580Q9UK33 172 aa16.04■□□□□ 0.16
HIF1A-206ENST00000553999 IGKV1D-13A0A0B4J2D9 117 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 LINC00473A8K010 186 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 SEC14L6B5MCN3 397 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 AIREO43918 545 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 TUSC2O75896 110 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 CRYZL1O95825 349 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 IGLV2-23P01705 113 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 IGKV1-13P0DP09 117 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 TPPP2P59282 170 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 CBX3Q13185 183 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 RTL8BQ17RB0 113 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 C19orf54Q5BKX5 351 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 ASPHD1Q5U4P2 390 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 GVQW1Q8N7I0 195 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 OR5T1Q8NG75 326 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 UBE2E2Q96LR5 201 aa16.03■□□□□ 0.16
HIF1A-206ENST00000553999 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.03■□□□□ 0.16
HIF1A-206ENST00000553999 SRRM4A7MD48 611 aaKnown RBP16.02■□□□□ 0.16
HIF1A-206ENST00000553999 SPDEFO95238 335 aa16.02■□□□□ 0.16
HIF1A-206ENST00000553999 SLURP1P55000 103 aa16.02■□□□□ 0.16
HIF1A-206ENST00000553999 GPHA2Q96T91 129 aa16.02■□□□□ 0.16
HIF1A-206ENST00000553999 RNF5Q99942 180 aa16.02■□□□□ 0.16
HIF1A-206ENST00000553999 GPR61Q9BZJ8 451 aa16.02■□□□□ 0.16
HIF1A-206ENST00000553999 VCX3AQ9NNX9 186 aa16.02■□□□□ 0.16
HIF1A-206ENST00000553999 NUBP2Q9Y5Y2 271 aa16.02■□□□□ 0.16
HIF1A-206ENST00000553999 ETV7Q9Y603 341 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms