RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 NEURL1O76050 574 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 OR4A8P0C604 315 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 PPP1CBP62140 327 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 TDHQ8IZJ6 230 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 CT55Q8WUE5 264 aa14.73□□□□□ -0.05
SYNE3-202ENST00000553340 DOCK10Q96BY6 2186 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 A0A0U1RQK1 487 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 ZNF320A2RRD8 509 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 MPLP40238 635 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 MAGEA5P43359 124 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 OR3A1P47881 315 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 NUTF2P61970 127 aaKnown RBP14.72□□□□□ -0.05
SYNE3-202ENST00000553340 WASF3Q9UPY6 502 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 TRAPPC1Q9Y5R8 145 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 TMEM30CPA0ZSE6 113 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 RAB29O14966 203 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 TMPRSS2O15393 492 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 CLDN14O95500 239 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 DEFA4P12838 97 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 H2BFWTQ7Z2G1 175 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 NANOS1Q8WY41 292 aaKnown RBP14.72□□□□□ -0.05
SYNE3-202ENST00000553340 GP6Q9HCN6 339 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 FKBP11Q9NYL4 201 aa14.72□□□□□ -0.05
SYNE3-202ENST00000553340 C17orf98A8MV24 154 aa14.71□□□□□ -0.05
SYNE3-202ENST00000553340 RPL15P61313 204 aaKnown RBP14.71□□□□□ -0.05
SYNE3-202ENST00000553340 EIF4EBP1Q13541 118 aaPredicted RBP14.71□□□□□ -0.05
SYNE3-202ENST00000553340 C6orf15Q6UXA7 325 aaPredicted RBP14.71□□□□□ -0.05
SYNE3-202ENST00000553340 MDP1Q86V88 176 aa14.71□□□□□ -0.05
SYNE3-202ENST00000553340 C5orf30Q96GV9 206 aa14.71□□□□□ -0.05
SYNE3-202ENST00000553340 DIRC2Q96SL1 478 aa14.71□□□□□ -0.05
SYNE3-202ENST00000553340 IMMP2LQ96T52 175 aa14.71□□□□□ -0.05
SYNE3-202ENST00000553340 NEU1Q99519 415 aa14.71□□□□□ -0.05
SYNE3-202ENST00000553340 PLA2G3Q9NZ20 509 aa14.71□□□□□ -0.05
SYNE3-202ENST00000553340 EREGO14944 169 aa14.71□□□□□ -0.06
SYNE3-202ENST00000553340 SCGB1D1O95968 90 aa14.71□□□□□ -0.06
SYNE3-202ENST00000553340 GNB1P62873 340 aa14.71□□□□□ -0.06
SYNE3-202ENST00000553340 NINJ1Q92982 152 aa14.71□□□□□ -0.06
SYNE3-202ENST00000553340 HES7Q9BYE0 225 aa14.71□□□□□ -0.06
SYNE3-202ENST00000553340 DOCK11Q5JSL3 2073 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 C12orf77C9JDV5 145 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 HAND1O96004 215 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 CRYAAP02489 173 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 CST9LP1Q5W188 147 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 FIP1L1Q6UN15 594 aaKnown RBP14.7□□□□□ -0.06
SYNE3-202ENST00000553340 TMEM144Q7Z5S9 345 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 TCTEX1D1Q8N7M0 179 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 OR52L2PQ8NGH6 319 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 WDYHV1Q96HA8 205 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 TTTY12Q9BZ98 90 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 C12orf49Q9H741 205 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 BRWD1-AS2P59051 145 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 FOXL1Q12952 345 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 TBC1D28Q2M2D7 210 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 ABHD17BQ5VST6 288 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 TIPARPQ7Z3E1 657 aaKnown RBP14.7□□□□□ -0.06
SYNE3-202ENST00000553340 KCNIP2Q9NS61 270 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 AURKAIP1Q9NWT8 199 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-202ENST00000553340 PXMP4Q9Y6I8 212 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 DOCK7Q96N67 2140 aa14.7□□□□□ -0.06
SYNE3-202ENST00000553340 IGHV3-64DA0A0J9YX35 117 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 OOEPA6NGQ2 149 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 GALR2O43603 387 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-202ENST00000553340 PSPNO60542 156 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 NDUFB4O95168 129 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 EGR1P18146 543 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 UBE2G2P60604 165 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 ERVFC1-1P60608 527 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 BCL2L2Q92843 193 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-202ENST00000553340 WFIKKN1Q96NZ8 548 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 F6UZH7 168 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 ATP5G3P48201 142 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 CEBPDP49716 269 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-202ENST00000553340 TMEM249Q2WGJ8 235 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 SPINK9Q5DT21 86 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 TEX38Q6PEX7 206 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 BTNL3Q6UXE8 466 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 RAB1CQ92928 201 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 TAAR6Q96RI8 345 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 KMT2EQ8IZD2 1858 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 USF3Q68DE3 2245 aa14.69□□□□□ -0.06
SYNE3-202ENST00000553340 PCSK5Q92824 1860 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 A0A1W2PPV4 95 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 PATE3B3GLJ2 98 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 HBZP02008 142 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 GRPP07492 148 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 C3AR1Q16581 482 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 OR2J1Q9GZK6 312 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 WDR83OSQ9Y284 106 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 J3QW42 95 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 CD1BP29016 333 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 PLGLB1Q02325 96 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 C1orf194Q5T5A4 169 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 FAM53AQ6NSI3 398 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-202ENST00000553340 TMEM251Q8N6I4 163 aa14.68□□□□□ -0.06
SYNE3-202ENST00000553340 TRAV38-1A0A0B4J264 116 aa14.67□□□□□ -0.06
SYNE3-202ENST00000553340 SOX15O60248 233 aa14.67□□□□□ -0.06
SYNE3-202ENST00000553340 C1QTNF9P0C862 333 aa14.67□□□□□ -0.06
SYNE3-202ENST00000553340 BMP5P22003 454 aa14.67□□□□□ -0.06
SYNE3-202ENST00000553340 MRPL49Q13405 166 aaKnown RBP14.67□□□□□ -0.06
SYNE3-202ENST00000553340 OR1C1Q15619 314 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms