RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 HIST1H2BAQ96A08 127 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 MRPL37Q9BZE1 423 aaKnown RBP15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 SEBOXQ9HB31 216 aaPredicted RBP15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 ATMQ13315 3056 aa15.4■□□□□ 0.06
PRPF40B-208ENST00000548436 UBE2L5PA0A1B0GUS4 154 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 A8MXE2 369 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 ZG16O60844 167 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 RHEBQ15382 184 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 KRTCAP3Q53RY4 240 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 PARD6GQ9BYG4 376 aaPredicted RBP15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 TUBA4BQ9H853 241 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 GNG12Q9UBI6 72 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 NDUFA2O43678 99 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 HSPB1P04792 205 aaKnown RBP15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 BMP5P22003 454 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 DUTP33316 252 aaKnown RBP15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 GPR12P47775 334 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 CEBPGP53567 150 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 LOXL3P58215 753 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 RAB2AP61019 212 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 ZFP82Q8N141 532 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 PPP1R35Q8TAP8 253 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 EDARADDQ8WWZ3 215 aa15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 TAF15Q92804 592 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRPF40B-208ENST00000548436 MARCH11A6NNE9 402 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 PMS2P5A8MQ11 134 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 IGHV3-7P01780 117 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 SELLP14151 372 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 FOLR2P14207 255 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 EDDM3BP56851 147 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 SERF2P84101 59 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 CYB561D1Q8N8Q1 229 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 C2CD4CQ8TF44 421 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 JPT1Q9UK76 154 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 LAMP3Q9UQV4 416 aa15.38■□□□□ 0.05
PRPF40B-208ENST00000548436 A0A1W2PPH5 198 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 YPEL1O60688 119 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 ARG1P05089 322 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 ZNF134P52741 427 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 SPINK9Q5DT21 86 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 LCN15Q6UWW0 184 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 DTD1Q8TEA8 209 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 MBD3L1Q8WWY6 194 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 RCC1LQ96I51 464 aaKnown RBP15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 YPEL2Q96QA6 119 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 LOC102723971A0A1B0GUV8 181 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 A0A1W2PPE2 198 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 F2RL2O00254 374 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 KHDC3LQ587J8 217 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 UTF1Q5T230 341 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 FAM180AQ6UWF9 173 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 GNG13Q9P2W3 67 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 ANKRD11Q6UB99 2663 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 DYSFO75923 2080 aa15.37■□□□□ 0.05
PRPF40B-208ENST00000548436 TET2Q6N021 2002 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 H3BQ15 152 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 CCKARP32238 428 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 PLA2G5P39877 138 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 GATA4P43694 442 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 FGF8P55075 233 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 ELLP55199 621 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 RPS16P62249 146 aaKnown RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 HNF4GQ14541 408 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 ZNF787Q6DD87 383 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 DUX4L9Q6RFH8 374 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 R3HDM4Q96D70 268 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 ZNF665Q9H7R5 613 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 UNKLQ9H9P5 680 aaKnown RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 GCM1Q9NP62 436 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 FCGR3BO75015 233 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 RBMXL2O75526 392 aaKnown RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 IGHV1-46P01743 117 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 MT-ND4LP03901 98 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 OR9G9P0C7N8 305 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 CD40P25942 277 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 HABP2Q14520 560 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 RPL39P5Q59GN2 51 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 TMEM41BQ5BJD5 291 aa15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 KLF2Q9Y5W3 355 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-208ENST00000548436 ATXN7O15265 892 aaPredicted RBP15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 CGB3P0DN86 165 aa15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 CGB7P0DN87 165 aa15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 RPS23P62266 143 aaKnown RBP15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 FAM222BQ8WU58 562 aa15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 ABHD17AQ96GS6 310 aa15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 QTRT1Q9BXR0 403 aaKnown RBP15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 FAM234AQ9H0X4 552 aa15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 IFI27L2Q9H2X8 130 aa15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 CALYQ9NYX4 217 aa15.35■□□□□ 0.05
PRPF40B-208ENST00000548436 MKRN2OSH3BPM6 223 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 M0R1X1 148 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 SLC31A2O15432 143 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 EIF3GO75821 320 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 IGKV1D-33P01593 117 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 IGKV1-33P01594 117 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 TNFAIP6P98066 277 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 C17orf58Q2M2W7 97 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 C1orf229Q6ZS94 237 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 CENPVQ7Z7K6 275 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 ZNF429Q86V71 674 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms