RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 FAM90A9PA6NNJ1 464 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 DHFRP00374 187 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 FAM157CP0CG43 387 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 AKAIN1P0CW23 69 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 CT45A6P0DMU7 189 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 CT45A5P0DMU8 189 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 CT45A7P0DMV0 189 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 SRD5A1P18405 259 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 C4BPBP20851 252 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 SRP14P37108 136 aaKnown RBP8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 REG1BP48304 166 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 RAB7AP51149 207 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 RAB13P51153 203 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 SSX2Q16385 188 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 RNASE10Q5GAN6 216 aaKnown RBP8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 Q6YL49 198 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 LURAP1LQ8IV03 231 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 ARRDC1Q8N5I2 433 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 DRAM1Q8N682 238 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 TEX29Q8N6K0 151 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 SIGLECL1Q8N7X8 197 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 ZNF680Q8NEM1 530 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 OR51S1Q8NGJ8 323 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 OR10X1Q8NGY0 326 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 FAM216AQ8WUB2 273 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 GPHA2Q96T91 129 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 NABP2Q9BQ15 211 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 C7orf50Q9BRJ6 194 aaKnown RBP8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 MRPL20Q9BYC9 149 aaKnown RBP8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 MS4A7Q9GZW8 240 aaPredicted RBP8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 OR2D2Q9H210 308 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 CCL28Q9NRJ3 127 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 COPZ2Q9P299 210 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 HSPB11Q9Y547 144 aa8.58□□□□□ -1.04
NPIPB3-210ENST00000542817 ANK2Q01484 3957 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 IGHV1-3A0A0C4DH29 117 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 LINC00473A8K010 186 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 HSD17B6O14756 317 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 RAB29O14966 203 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 TSPAN9O75954 239 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 AMY2AP04746 511 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 HNF1AP20823 631 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 SLC6A1P30531 599 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 DYNLT3P51808 116 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 LUMP51884 338 aaPredicted RBP8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 RPL30P62888 115 aaKnown RBP8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 MEF2DQ14814 521 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 ZNF818PQ6ZRF7 136 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 TOMM5Q8N4H5 51 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 ZNF383Q8NA42 475 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 TERB2Q8NHR7 220 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 DDB2Q92466 427 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 PIPOXQ9P0Z9 390 aa8.57□□□□□ -1.04
NPIPB3-210ENST00000542817 OOSP1A8MZH6 123 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 TIMM23O14925 209 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 IGHV4-59P01825 116 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 FBP1P09467 338 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 RRASP10301 218 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 DUTP33316 252 aaKnown RBP8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 IER3P46695 156 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 UCP3P55916 312 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 LGALS4P56470 323 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 FXYD4P59646 89 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 AANATQ16613 207 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 PLA1AQ53H76 456 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 FAM71F2Q6NXP2 309 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 Q8N6K4 173 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 ZNF645Q8N7E2 425 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 ZDHHC22Q8N966 263 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 BVESQ8NE79 360 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 OR8H1Q8NGG4 311 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 ZNF431Q8TF32 576 aaPredicted RBP8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 SECTM1Q8WVN6 248 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 RITA1Q96K30 269 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 RTBDNQ9BSG5 229 aaPredicted RBP8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 RSRP1Q9BUV0 290 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 GHITMQ9H3K2 345 aa8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 AMMECR1Q9Y4X0 333 aaPredicted RBP8.56□□□□□ -1.04
NPIPB3-210ENST00000542817 IGHV3-72A0A0B4J1Y9 119 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 LINC00854A0A1B0GVQ3 168 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 H0YJW9 148 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 GAPDHP04406 335 aaKnown RBP8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 ANXA3P12429 323 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 PI3P19957 117 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 CD24P25063 80 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 GPR12P47775 334 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 CCR6P51684 374 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 TSPAN5P62079 268 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 EBI3Q14213 229 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 SLC9A3R2Q15599 337 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 MSMO1Q15800 293 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 ZNF57Q68EA5 555 aaPredicted RBP8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 GLDNQ6ZMI3 551 aaPredicted RBP8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 TMEM17Q86X19 198 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 OR8H3Q8N146 312 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 UXS1Q8NBZ7 420 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 OR5AN1Q8NGI8 311 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 MARCH1Q8TCQ1 289 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 TOMM40LQ969M1 308 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms