RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 C19orf54Q5BKX5 351 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 ZNF773Q6PK81 442 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 PDPNQ86YL7 162 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 ABHD5Q8WTS1 349 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 FLYWCH2Q96CP2 140 aaKnown RBP12.77□□□□□ -0.37
CCND1-205ENST00000542367 OR5B12Q96R08 314 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 TSNAXQ99598 290 aaKnown RBP12.77□□□□□ -0.37
CCND1-205ENST00000542367 FAM103A1Q9BTL3 118 aaKnown RBP12.77□□□□□ -0.37
CCND1-205ENST00000542367 OR2D2Q9H210 308 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 OR51E2Q9H255 320 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 GAB2Q9UQC2 676 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 VSIG4Q9Y279 399 aa12.77□□□□□ -0.37
CCND1-205ENST00000542367 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 SOX15O60248 233 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 DIRAS3O95661 229 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 CA2P00918 260 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 LUMP51884 338 aaPredicted RBP12.76□□□□□ -0.37
CCND1-205ENST00000542367 TMEM267Q0VDI3 215 aaPredicted RBP12.76□□□□□ -0.37
CCND1-205ENST00000542367 ARL6IP1Q15041 203 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCND1-205ENST00000542367 ZNF562Q6V9R5 426 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 PPP1R27Q86WC6 154 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 OR1N2Q8NGR9 330 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 CASTOR1Q8WTX7 329 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 GINS4Q9BRT9 223 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 SLC35D1Q9NTN3 355 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 DAPK2Q9UIK4 370 aa12.76□□□□□ -0.37
CCND1-205ENST00000542367 FOXA2Q9Y261 457 aaPredicted RBP12.76□□□□□ -0.37
CCND1-205ENST00000542367 RRP15Q9Y3B9 282 aaKnown RBP12.76□□□□□ -0.37
CCND1-205ENST00000542367 RBM7Q9Y580 266 aaKnown RBP12.76□□□□□ -0.37
CCND1-205ENST00000542367 SPDEFO95238 335 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 SDC2P34741 201 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 GNB1P62873 340 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 RUNX1Q01196 453 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 C9orf66Q5T8R8 295 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 UNQ5815/PRO19632Q6UWF5 114 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 Q6ZS49 121 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 TCTEX1D1Q8N7M0 179 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 CENPOQ9BU64 300 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 ST6GALNAC5Q9BVH7 336 aa12.75□□□□□ -0.37
CCND1-205ENST00000542367 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCND1-205ENST00000542367 ZMAT5Q9UDW3 170 aaKnown RBP12.75□□□□□ -0.37
CCND1-205ENST00000542367 SEC14L6B5MCN3 397 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 SLC25A17O43808 307 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 DTYMKP23919 212 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 DGCR2P98153 550 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 MXD1Q05195 221 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 ZNF616Q08AN1 781 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 AKIRIN2Q53H80 203 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 ASPHD1Q5U4P2 390 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 HACD4Q5VWC8 232 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 SFXN4Q6P4A7 337 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 LFNGQ8NES3 379 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 C5orf30Q96GV9 206 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 RNF167Q9H6Y7 350 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 TPSG1Q9NRR2 321 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 DNAH9Q9NYC9 4486 aa12.74□□□□□ -0.37
CCND1-205ENST00000542367 RAMP3O60896 148 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 IGLV2-23P01705 113 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 CLEC2LP0C7M8 214 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 OR8U8P0C7N1 319 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 FXYD3Q14802 87 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 NEDD8Q15843 81 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 ACTBL2Q562R1 376 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 H1FOOQ8IZA3 346 aaPredicted RBP12.73□□□□□ -0.37
CCND1-205ENST00000542367 BVESQ8NE79 360 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 LGALS14Q8TCE9 139 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 MS4A10Q96PG2 267 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 ALX4Q9H161 411 aaPredicted RBP12.73□□□□□ -0.37
CCND1-205ENST00000542367 SCOCQ9UIL1 159 aa12.73□□□□□ -0.37
CCND1-205ENST00000542367 LOC100506127A0A0U1RQW1 187 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 TMEM235A6NFC5 223 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 ARPC1BO15143 372 aaKnown RBP12.72□□□□□ -0.37
CCND1-205ENST00000542367 SCGNO76038 276 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 CD36P16671 472 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 LGALS7P47929 136 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 TAGLNQ01995 201 aaKnown RBP12.72□□□□□ -0.37
CCND1-205ENST00000542367 ZNF260Q3ZCT1 412 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 PYHIN1Q6K0P9 492 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 NUDCD2Q8WVJ2 157 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 ARPC1AQ92747 370 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 HARBI1Q96MB7 349 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
CCND1-205ENST00000542367 J3QRK9 145 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 SHOXO15266 292 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 CNIH1O95406 144 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 CRYGBP07316 175 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 CD40LGP29965 261 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 PITPNAQ00169 270 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 PJVKQ0ZLH3 352 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 CBX3Q13185 183 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 KCTD21Q4G0X4 260 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 TMEM177Q53S58 311 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 GRPEL2Q8TAA5 225 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 DCUN1D4Q92564 292 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 RHBDL2Q9NX52 303 aa12.71□□□□□ -0.37
CCND1-205ENST00000542367 SRRM4A7MD48 611 aaKnown RBP12.7□□□□□ -0.38
CCND1-205ENST00000542367 LINC01619G3V211 115 aa12.7□□□□□ -0.38
CCND1-205ENST00000542367 SSX5O60225 188 aa12.7□□□□□ -0.38
CCND1-205ENST00000542367 LGALS1P09382 135 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms