RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 LGALS14Q8TCE9 139 aa11.65□□□□□ -0.54
RAB40B-202ENST00000538809 RNF5Q99942 180 aa11.65□□□□□ -0.54
RAB40B-202ENST00000538809 CENPOQ9BU64 300 aa11.65□□□□□ -0.54
RAB40B-202ENST00000538809 OR2D2Q9H210 308 aa11.65□□□□□ -0.54
RAB40B-202ENST00000538809 DNAH9Q9NYC9 4486 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 SOX15O60248 233 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 IGKV1-16P04430 117 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 TFAP2AP05549 437 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 SCAND1P57086 179 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 GNB1P62873 340 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 CX3CL1P78423 397 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 FHL3Q13643 280 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 KIAA0141Q14154 515 aaPredicted RBP11.64□□□□□ -0.55
RAB40B-202ENST00000538809 ARL6IP1Q15041 203 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 ZNF260Q3ZCT1 412 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 CDNFQ49AH0 187 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 HACD4Q5VWC8 232 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 OR11H1Q8NG94 326 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 SLC25A38Q96DW6 304 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 UBE2E2Q96LR5 201 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
RAB40B-202ENST00000538809 TPSG1Q9NRR2 321 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 METTL1Q9UBP6 276 aaKnown RBP11.64□□□□□ -0.55
RAB40B-202ENST00000538809 VSIG4Q9Y279 399 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 TNCP24821 2201 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 SORL1Q92673 2214 aa11.64□□□□□ -0.55
RAB40B-202ENST00000538809 LOC100506127A0A0U1RQW1 187 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 SEC14L6B5MCN3 397 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 I3L521 148 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 CA2P00918 260 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 APOA2P02652 100 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 OR8U9P0C7N5 309 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 RAB9AP51151 201 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 RPS16P62249 146 aaKnown RBP11.63□□□□□ -0.55
RAB40B-202ENST00000538809 MXD1Q05195 221 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 ARFRP1Q13795 201 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 PSG5Q15238 335 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 ASPHD1Q5U4P2 390 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 ZNF660Q6AZW8 331 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-202ENST00000538809 H1FOOQ8IZA3 346 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-202ENST00000538809 MINDY2Q8NBR6 621 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 OR5H6Q8NGV6 325 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 OR10J5Q8NHC4 309 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 ALX4Q9H161 411 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-202ENST00000538809 SLC35D1Q9NTN3 355 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 SDHAF2Q9NX18 166 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 RHBDL2Q9NX52 303 aa11.63□□□□□ -0.55
RAB40B-202ENST00000538809 FOXA2Q9Y261 457 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-202ENST00000538809 TMEM235A6NFC5 223 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 TRIM64CA6NLI5 447 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 SLC25A17O43808 307 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 SSX5O60225 188 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 SCGNO76038 276 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 EGR2P11161 476 aaPredicted RBP11.62□□□□□ -0.55
RAB40B-202ENST00000538809 DGCR2P98153 550 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 C9orf66Q5T8R8 295 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 C11orf87Q6NUJ2 197 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 PDPNQ86YL7 162 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 NUDCD2Q8WVJ2 157 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 YIPF6Q96EC8 236 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 DCSTAMPQ9H295 470 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 ETV7Q9Y603 341 aa11.62□□□□□ -0.55
RAB40B-202ENST00000538809 SPDEFO95238 335 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 OR8U8P0C7N1 319 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 TGFBR1P36897 503 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 TALDO1P37837 337 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 ZNF616Q08AN1 781 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 UNQ5815/PRO19632Q6UWF5 114 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 PPP1R27Q86WC6 154 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 OR1N2Q8NGR9 330 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 GRPEL2Q8TAA5 225 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 PRR25Q96S07 402 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 TSNAXQ99598 290 aaKnown RBP11.61□□□□□ -0.55
RAB40B-202ENST00000538809 GINS4Q9BRT9 223 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 NUBP2Q9Y5Y2 271 aa11.61□□□□□ -0.55
RAB40B-202ENST00000538809 A0A087WXM4 84 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 TNFAIP8O95379 198 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 IGLV2-23P01705 113 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 ECI1P42126 302 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 SSBP2P81877 361 aaPredicted RBP11.6□□□□□ -0.55
RAB40B-202ENST00000538809 RUNX1Q01196 453 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 ACTBL2Q562R1 376 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 LFNGQ8NES3 379 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 TSPAN14Q8NG11 270 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 DDB2Q92466 427 aa11.6□□□□□ -0.55
RAB40B-202ENST00000538809 FLYWCH2Q96CP2 140 aaKnown RBP11.6□□□□□ -0.55
RAB40B-202ENST00000538809 RBM7Q9Y580 266 aaKnown RBP11.6□□□□□ -0.55
RAB40B-202ENST00000538809 ARPC1BO15143 372 aaKnown RBP11.59□□□□□ -0.55
RAB40B-202ENST00000538809 TMEM127O75204 238 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 IGHV3-11P01762 117 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 CRYGBP07316 175 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 SLURP1P55000 103 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 PITPNAQ00169 270 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 CD69Q07108 199 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 TIMM50Q3ZCQ8 353 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 IDNKQ5T6J7 187 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 BVESQ8NE79 360 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 DCUN1D4Q92564 292 aa11.59□□□□□ -0.55
RAB40B-202ENST00000538809 ARPC1AQ92747 370 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms