RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 HSPB9Q9BQS6 159 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 CCDC160A6NGH7 325 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 SLC22A5O76082 557 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 C10orf99Q6UWK7 81 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 OVCH2Q7RTZ1 564 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 OR5AU1Q8NGC0 362 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 DDB2Q92466 427 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 ADTRPQ96IZ2 230 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 ABHD1Q96SE0 405 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 EHFQ9NZC4 300 aa17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 ZNF107Q9UII5 783 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 RBMX2Q9Y388 322 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-204ENST00000535399 LINC00473A8K010 186 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 RRHO14718 337 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 PPYP01298 95 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 PMP2P02689 132 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 RFX2P48378 723 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 TAS2R46P59540 309 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 EIF4EBP1Q13541 118 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 DYRK1AQ13627 763 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 ZNF660Q6AZW8 331 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 OR5H2Q8NGV7 314 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 NXF2Q9GZY0 626 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 KIAA1456Q9P272 454 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 RSL24D1Q9UHA3 163 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 LINC00527Q9UJ94 153 aa17.93■□□□□ 0.46
SFSWAP-204ENST00000535399 ZNF701M0R085 212 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 KCNAB3O43448 404 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 HLA-DRB1P01911 266 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 HLA-DMAP28067 261 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 RCVRNP35243 200 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 TAGLNQ01995 201 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 TCTEX1D4Q5JR98 221 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 DHRS11Q6UWP2 260 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 FOXRED2Q8IWF2 684 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 BVESQ8NE79 360 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 FLYWCH2Q96CP2 140 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 CITED2Q99967 270 aaPredicted RBP17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 FBXL15Q9H469 300 aa17.92■□□□□ 0.46
SFSWAP-204ENST00000535399 M0QZ24 198 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 AP4M1O00189 453 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 HRH1P35367 487 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 RPS16P62249 146 aaKnown RBP17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 PSG5Q15238 335 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 MSMO1Q15800 293 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 RNASE12Q5GAN4 147 aaKnown RBP17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 LIN54Q6MZP7 749 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 STPG2Q8N412 459 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 OR52I2Q8NH67 350 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 CHPT1Q8WUD6 406 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 SECTM1Q8WVN6 248 aa17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 TSNAXQ99598 290 aaKnown RBP17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 C6orf62Q9GZU0 229 aaPredicted RBP17.91■□□□□ 0.46
SFSWAP-204ENST00000535399 MGAM2Q2M2H8 2515 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 IGHV7-81A0A0B4J1V7 117 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 PSMB11A5LHX3 300 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 SPDEFO95238 335 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 RRASP10301 218 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 RPL30P62888 115 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 CD83Q01151 205 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 RTL8BQ17RB0 113 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 TMEM177Q53S58 311 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 ZNF329Q86UD4 541 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 C15orf40Q8WUR7 153 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 SLC5A7Q9GZV3 580 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 CCL28Q9NRJ3 127 aa17.9■□□□□ 0.46
SFSWAP-204ENST00000535399 ADARB2-AS1A8MUL3 147 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 IGLV2-23P01705 113 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 FXYD4P59646 89 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 MCFD2Q8NI22 146 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 DIRAS2Q96HU8 199 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 HSD17B10Q99714 261 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 ZNF2Q9BSG1 426 aaPredicted RBP17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 DCUN1D5Q9BTE7 237 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 METTL1Q9UBP6 276 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 KLK11Q9UBX7 282 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 MTFP1Q9UDX5 166 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 WNK1Q9H4A3 2382 aa17.89■□□□□ 0.45
SFSWAP-204ENST00000535399 FCN1O00602 326 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 TSPAN15O95858 294 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 IGF1P05019 195 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 LGALS7P47929 136 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 HERV-K104P61576 105 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 C2orf68Q2NKX9 166 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 KCTD9Q7L273 389 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 NDUFA11Q86Y39 141 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 OR4X2Q8NGF9 303 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 MOB3AQ96BX8 217 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 GPHA2Q96T91 129 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 OR51J1Q9H342 316 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 ZNF580Q9UK33 172 aa17.88■□□□□ 0.45
SFSWAP-204ENST00000535399 FBN3Q75N90 2809 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 SRRM4A7MD48 611 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 SLC25A17O43808 307 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 CRYZL1O95825 349 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 DGCR2P98153 550 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 NDPQ00604 133 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 CBX3Q13185 183 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 PLGLAQ15195 96 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 PYHIN1Q6K0P9 492 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms