RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 FXYD3Q14802 87 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 PLAC9Q5JTB6 97 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 OVCH2Q7RTZ1 564 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 OR6Q1Q8NGQ2 317 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 OR4C12Q96R67 309 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 MGLLQ99685 303 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 DUSP21Q9H596 190 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 SLA2Q9H6Q3 261 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 SLC35D1Q9NTN3 355 aa13.75□□□□□ -0.21
PCF11-206ENST00000533018 HUWE1Q7Z6Z7 4374 aaKnown RBP13.75□□□□□ -0.21
PCF11-206ENST00000533018 IGKV1-6A0A0C4DH72 117 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 SPDEFO95238 335 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 OR8U9P0C7N5 309 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 GP9P14770 177 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 MAP2K4P45985 399 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 PSMD7P51665 324 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 ACSM6Q6P461 480 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 NRG4Q8WWG1 115 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 ACOT13Q9NPJ3 140 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 TPSG1Q9NRR2 321 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 RAB22AQ9UL26 194 aa13.74□□□□□ -0.21
PCF11-206ENST00000533018 RBM7Q9Y580 266 aaKnown RBP13.74□□□□□ -0.21
PCF11-206ENST00000533018 A0A075B6Q4 140 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 TMEM272A0A1B0GTI8 110 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 C13orf42A0A1B0GVH6 325 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 SERPINB10P48595 397 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 PLA2G7Q13093 441 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 CBX3Q13185 183 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 SBSPONQ8IVN8 264 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 OR5T1Q8NG75 326 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 OR4A4PQ8NGN8 299 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 OR10J5Q8NHC4 309 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 RAB3CQ96E17 227 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 RHOVQ96L33 236 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 RSRP1Q9BUV0 290 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 ELOVL1Q9BW60 279 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 OR2D2Q9H210 308 aa13.73□□□□□ -0.21
PCF11-206ENST00000533018 FABP7O15540 132 aa13.72□□□□□ -0.21
PCF11-206ENST00000533018 SRSF7Q16629 238 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCF11-206ENST00000533018 IGSF11Q5DX21 431 aa13.72□□□□□ -0.21
PCF11-206ENST00000533018 PRSS48Q7RTY5 328 aa13.72□□□□□ -0.21
PCF11-206ENST00000533018 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.72□□□□□ -0.21
PCF11-206ENST00000533018 ANKRD34BA5PLL1 514 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 PDCD5O14737 125 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 ARPC1BO15143 372 aaKnown RBP13.71□□□□□ -0.21
PCF11-206ENST00000533018 FRMD6-AS1P0C7T7 363 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 GSTT2P0CG29 244 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 GSTT2BP0CG30 244 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 GNB3P16520 340 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 CRHBPP24387 322 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 GADD45AP24522 165 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 PJVKQ0ZLH3 352 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 HAPLN4Q86UW8 402 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 POC5Q8NA72 575 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 MAFIPQ8WZ33 124 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 HARBI1Q96MB7 349 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 GINS4Q9BRT9 223 aa13.71□□□□□ -0.21
PCF11-206ENST00000533018 A0A0G2JLM5 398 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 C3orf84H3BNL1 204 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 LDLRAD4O15165 306 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 SHOXO15266 292 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 FCGR3AP08637 254 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 TALDO1P37837 337 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 LGALS7P47929 136 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 MOGAT2Q3SYC2 334 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 ANKRD13BQ86YJ7 626 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 OR10R2Q8NGX6 335 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 RCHY1Q96PM5 261 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 PHB2Q99623 299 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 ZMAT4Q9H898 229 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 RANGRFQ9HD47 186 aaPredicted RBP13.7□□□□□ -0.22
PCF11-206ENST00000533018 SDHAF2Q9NX18 166 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 ZNF230Q9UIE0 474 aaPredicted RBP13.7□□□□□ -0.22
PCF11-206ENST00000533018 KCNK7Q9Y2U2 307 aa13.7□□□□□ -0.22
PCF11-206ENST00000533018 TRIM64CA6NLI5 447 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 ZP3P21754 424 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 MYL9P24844 172 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 OR10A3P58181 314 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 RTL8BQ17RB0 113 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 BVESQ8NE79 360 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 CNBD2Q96M20 576 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 VCX3BQ9H321 246 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 STUB1Q9UNE7 303 aa13.69□□□□□ -0.22
PCF11-206ENST00000533018 TRBV6-7A0A0A0MS04 114 aa13.68□□□□□ -0.22
PCF11-206ENST00000533018 H3BUA1 57 aa13.68□□□□□ -0.22
PCF11-206ENST00000533018 IGLV2-23P01705 113 aa13.68□□□□□ -0.22
PCF11-206ENST00000533018 APELAP0DMC3 54 aa13.68□□□□□ -0.22
PCF11-206ENST00000533018 ARFRP1Q13795 201 aa13.68□□□□□ -0.22
PCF11-206ENST00000533018 ZNF367Q7RTV3 350 aa13.68□□□□□ -0.22
PCF11-206ENST00000533018 CABLES2Q9BTV7 478 aa13.68□□□□□ -0.22
PCF11-206ENST00000533018 COA4Q9NYJ1 87 aa13.68□□□□□ -0.22
PCF11-206ENST00000533018 METTL21EPA6NDL7 271 aa13.67□□□□□ -0.22
PCF11-206ENST00000533018 ERICH4A6NGS2 130 aa13.67□□□□□ -0.22
PCF11-206ENST00000533018 IFITM5A6NNB3 132 aa13.67□□□□□ -0.22
PCF11-206ENST00000533018 RAB3BP20337 219 aa13.67□□□□□ -0.22
PCF11-206ENST00000533018 DEFA5Q01523 94 aa13.67□□□□□ -0.22
PCF11-206ENST00000533018 TAGLNQ01995 201 aaKnown RBP13.67□□□□□ -0.22
PCF11-206ENST00000533018 TBCEQ15813 527 aaPredicted RBP13.67□□□□□ -0.22
PCF11-206ENST00000533018 SSX1Q16384 188 aa13.67□□□□□ -0.22
PCF11-206ENST00000533018 BLOC1S6Q9UL45 172 aa13.67□□□□□ -0.22
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