RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 AREGP15514 252 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 ATP5G2Q06055 141 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 GBGT1Q8N5D6 347 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 MRPL30Q8TCC3 161 aaKnown RBP13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 ABCA7Q8IZY2 2146 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 LINC00869P0C866 280 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 ZNF708P17019 499 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 PPOXP50336 477 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 FAM168AQ92567 244 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 TMEM204Q9BSN7 226 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 TMEM222Q9H0R3 208 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 TNFSF18Q9UNG2 199 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 ARFGEF1Q9Y6D6 1849 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 RPL7P18124 248 aaKnown RBP13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 RAB9AP51151 201 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 LRP11Q86VZ4 500 aa13.93□□□□□ -0.18
PCDHA3-201ENST00000522353 AP4M1O00189 453 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 HSPE1P61604 102 aaKnown RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 DLK1P80370 383 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 NRN1LQ496H8 165 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 ZNF738Q8NE65 137 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 SMDT1Q9H4I9 107 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 COL11A1P12107 1806 aaPredicted RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 ISLRO14498 428 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 CELA3AP09093 270 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 RNASE6Q93091 150 aaKnown RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 MEGF10Q96KG7 1140 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 GCM2O75603 506 aaPredicted RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 CECR9P0C854 216 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 Q6ZN92 141 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 TLNRD1Q9H1K6 362 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 ZNF430Q9H8G1 570 aaPredicted RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 LGALSLQ3ZCW2 172 aaPredicted RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 H1FOOQ8IZA3 346 aaPredicted RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 IL22RA2Q969J5 263 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 AKIRIN1Q9H9L7 192 aaPredicted RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 MRPS18CQ9Y3D5 142 aaKnown RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 C7orf77A4D0Y5 90 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 QTRT1Q9BXR0 403 aaKnown RBP13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 PXMP4Q9Y6I8 212 aa13.92□□□□□ -0.18
PCDHA3-201ENST00000522353 SPTBP11277 2137 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 IFITM3Q01628 133 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 ZNF418Q8TF45 676 aaPredicted RBP13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 LSM10Q969L4 123 aaKnown RBP13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 SYT8Q8NBV8 401 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 MRPL37Q9BZE1 423 aaKnown RBP13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 TMEM140Q9NV12 185 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 NCOR1O75376 2440 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 FAM90A26D6RGX4 464 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 NPIPB11E5RHQ5 1161 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 RND2P52198 227 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 LDLRAD3Q86YD5 345 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 MIA3Q5JRA6 1907 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 M0R143 59 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 S1PR2O95136 353 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 ZNF137PP52743 207 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 SUCLG1P53597 346 aaKnown RBP13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 NRIP2Q9BQI9 281 aa13.91□□□□□ -0.18
PCDHA3-201ENST00000522353 IGLV3-12A0A075B6K2 115 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 AKAP6Q13023 2319 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 TRBV5-7A0A0A0MS05 114 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 HLA-DQB1P01920 261 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 MRPL54Q6P161 138 aaKnown RBP13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 OR5P3Q8WZ94 311 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 MYO16Q9Y6X6 1858 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 H3BQ15 152 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 GLIPR1P48060 266 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 RELQ04864 619 aaPredicted RBP13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 RNFT1Q5M7Z0 435 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 FGFRL1Q8N441 504 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 TXNDC17Q9BRA2 123 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 RHBDL1O75783 438 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 RCC1P18754 421 aaPredicted RBP13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 BSPH1Q075Z2 132 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 PRNTQ86SH4 94 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 OR4C5Q8NGB2 326 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 EEF1AKMT3Q96AZ1 226 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 MAP1LC3CQ9BXW4 147 aa13.9□□□□□ -0.18
PCDHA3-201ENST00000522353 TMSB15BA0A087X1C1 80 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 PGLYRP1O75594 196 aaPredicted RBP13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 GPR132Q9UNW8 380 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 EGR4Q05215 589 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 OVCH2Q7RTZ1 564 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 OR2D3Q8NGH3 330 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 Q96M66 194 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 SOSTQ9BQB4 213 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 SSBP3Q9BWW4 388 aaPredicted RBP13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 HIST1H1BP16401 226 aaKnown RBP13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 SLC35E4Q6ICL7 350 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 PQLC2Q6ZP29 291 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 SPACA3Q8IXA5 215 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 DPM3Q9P2X0 92 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 KBTBD11O94819 623 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 TSPOP30536 169 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 FXYD3Q14802 87 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 EAF1Q96JC9 268 aaPredicted RBP13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 IFT22Q9H7X7 185 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 G6PC2Q9NQR9 355 aa13.89□□□□□ -0.19
PCDHA3-201ENST00000522353 NPIPB6E9PJ23 425 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms