RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 IGLV1-36A0A0B4J1U3 117 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 TMEM129A0AVI4 362 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 CDIPTO14735 213 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 ZNF207O43670 478 aaKnown RBP6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 USF1P22415 310 aaPredicted RBP6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 CEACAM6P40199 344 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 DVL1P1P54792 670 aaPredicted RBP6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 ELLP55199 621 aaPredicted RBP6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 RIPPLY1Q0D2K3 151 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 TMEM244Q5VVB8 128 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 ACOT7LQ6ZUV0 252 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 SLC16A9Q7RTY1 509 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 DCUN1D4Q92564 292 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 GALNT14Q96FL9 552 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 HIST1H2AAQ96QV6 131 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 PCGF1Q9BSM1 259 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 SLC25A31Q9H0C2 315 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 CNTD2Q9H8S5 307 aa6.64□□□□□ -1.35
LIMCH1-219ENST00000514096 DAPL1A0PJW8 107 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 OGG1O15527 345 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 GABRR1P24046 479 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 GPM6AP51674 278 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 FAM3AP98173 230 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 MST1LQ2TV78 715 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 ZNF322Q6U7Q0 402 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 MOB3CQ70IA8 216 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 FAM219AQ8IW50 185 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 OR2C3Q8N628 320 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 SPSB1Q96BD6 273 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 MSI2Q96DH6 328 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 CHRDL1Q9BU40 450 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 SAMD10Q9BYL1 202 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 WDR13Q9H1Z4 485 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 BARX1Q9HBU1 254 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 CLN8Q9UBY8 286 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 LOC102725191A0A1B0GVB3 256 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 C17orf100A8MU93 164 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 LMX1BO60663 402 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 PTHLHP12272 177 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 AKR1C4P17516 323 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 KRTDAPP60985 99 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 PLCXD3Q63HM9 321 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 AMMECR1LQ6DCA0 310 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 SLC18B1Q6NT16 456 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 FAM220AQ7Z4H9 259 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 C1orf87Q8N0U7 546 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 OR13C9Q8NGT0 318 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 UBALD1Q8TB05 177 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 FGGYQ96C11 551 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 EGLN1Q9GZT9 426 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 ENY2Q9NPA8 101 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 CMC2Q9NRP2 79 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 ZNF319Q9P2F9 582 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 LOC105371242A0A075B767 164 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 CORTO00230 105 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 DVL1O14640 695 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 TMPRSS2O15393 492 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 IGHV1-46P01743 117 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 TMEM267Q0VDI3 215 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 FFAR4Q5NUL3 377 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 GLYATL3Q5SZD4 288 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 HIST2H2BDQ6DRA6 164 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 MAGIXQ9H6Y5 334 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 TMEM100Q9NV29 134 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 C1orf123Q9NWV4 160 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 TMEFF2Q9UIK5 374 aaPredicted RBP6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 ZNF391Q9UJN7 358 aa6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 CARHSP1Q9Y2V2 147 aaKnown RBP6.63□□□□□ -1.35
LIMCH1-219ENST00000514096 DYSFO75923 2080 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 A0A1W2PPV4 95 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 GAGE12BA1L429 117 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 CD300LBA8K4G0 201 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 GYPAP02724 150 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 AMBPP02760 352 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 PSMB6P28072 239 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 MFAP4P55083 255 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 OR10A3P58181 314 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 TMEM255AQ5JRV8 349 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 ZNF770Q6IQ21 691 aaPredicted RBP6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 OR10S1Q8NGN2 331 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 MRGPRFQ96AM1 343 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 TIMD4Q96H15 378 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 WDFY2Q96P53 400 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 C1QTNF5Q9BXJ0 243 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 AUNIPQ9H7T9 357 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 GPR84Q9NQS5 396 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 WIPI2Q9Y4P8 454 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 LRP12Q9Y561 859 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 SOX21Q9Y651 276 aaPredicted RBP6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 ANKRD30BLA7E2S9 258 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 H0Y980 276 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 RPL36A-HNRNPH2H7BZ11 118 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 GLCEO94923 617 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 TNFRSF6BO95407 300 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 IL6RP08887 468 aaPredicted RBP6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 CDK5Q00535 292 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 GBGT1Q8N5D6 347 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 ZNF676Q8N7Q3 588 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 TPRX1Q8N7U7 411 aa6.62□□□□□ -1.35
LIMCH1-219ENST00000514096 OR6C6A6NF89 314 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms