RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 Q6ZR03 302 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 CENPVQ7Z7K6 275 aaPredicted RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 GGACTQ9BVM4 153 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 SFXN3Q9BWM7 321 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 DOK5Q9P104 306 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 TRAPPC2LQ9UL33 140 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 RBM7Q9Y580 266 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 HEATR1Q9H583 2144 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 M0R1B8 84 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 GATCO43716 136 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 RAB11AP62491 216 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 NKX6-1P78426 367 aaPredicted RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 FAM27E3Q08E93 113 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 TESK1Q15569 626 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 MSMPQ1L6U9 139 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 TIMM23BQ5SRD1 257 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 FAM90A2PQ658T7 463 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF826PQ6ZT77 177 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF295-AS1Q8N0V1 137 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 LILRB2Q8N423 598 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 SNRNP40Q96DI7 357 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 FAM210BQ96KR6 192 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 AGMATQ9BSE5 352 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 BCL2L14Q9BZR8 327 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 WDR61Q9GZS3 305 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 SDF2L1Q9HCN8 221 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 MBNL3Q9NUK0 354 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 KCNIP1Q9NZI2 227 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 PCNX1Q96RV3 2341 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 TRBV24-1A0A075B6N3 115 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 A0A0G2JNJ9 132 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 PRRG2O14669 202 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 PPP1R2P9O14990 202 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 CYB5BO43169 146 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 NXPH2O95156 264 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 LY86O95711 162 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 PGA5P0DJD9 388 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 ERVK11-1P61568 191 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 TMEM267Q0VDI3 215 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF146Q15072 292 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 NCMAPQ5T1S8 102 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 Q6ZRM9 215 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 IL1F10Q8WWZ1 152 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 GPHA2Q96T91 129 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 Q9UFV3 132 aa9.23□□□□□ -0.93
SH3RF1-203ENST00000508685 TMEM210A6NLX4 147 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 A8MXE2 369 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 SIRPB1O00241 398 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 WNT9BO14905 357 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 NXPH3O95157 252 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 IGKV1-39P01597 117 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 IGKV1-5P01602 117 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 IGLV2-14P01704 120 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 IGKV1D-39P04432 117 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 CXCL1P09341 107 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 KITLGP21583 273 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 GCH1P30793 250 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 CCKARP32238 428 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 ERVFRD-1P60508 538 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF718Q3SXZ3 478 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 PRAMEF6Q5VXH4 476 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 GFRALQ6UXV0 394 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 LRP11Q86VZ4 500 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 CA5BP1Q8WTZ4 195 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 SLC39A9Q9NUM3 307 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 LAMP3Q9UQV4 416 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 PLCE1Q9P212 2302 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 ZFP92A6NM28 416 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 TMEM250H0YL14 139 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 H3BP45 60 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 SLC33A1O00400 549 aaPredicted RBP9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 SOX15O60248 233 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 PTBP3O95758 552 aaKnown RBP9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 OR2H2O95918 312 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 METTL15P1P0C7V9 234 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF585BQ52M93 769 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 MBNL2Q5VZF2 373 aaKnown RBP9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 TMEM14EPQ6UXP3 125 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 C11orf53Q8IXP5 236 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 FAM169BQ8N8A8 192 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 TAF15Q92804 592 aaKnown RBP eCLIP9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 RCC1LQ96I51 464 aaKnown RBP9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 UFSP2Q9NUQ7 469 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 OR1A1Q9P1Q5 309 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 OR14J1Q9UGF5 321 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 NAT8Q9UHE5 227 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 DUSP13Q9UII6 198 aa9.22□□□□□ -0.93
SH3RF1-203ENST00000508685 PPP1R3CQ9UQK1 317 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms