RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PDPNQ86YL7 162 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 DDB2Q92466 427 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 CITED2Q99967 270 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 SLIRPQ9GZT3 109 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 SLC35D1Q9NTN3 355 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 EXTL2Q9UBQ6 330 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 ADAM30Q9UKF2 790 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 WNK1Q9H4A3 2382 aa14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 ADARB2-AS1A8MUL3 147 aa14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 M0QZ24 198 aa14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 RBBP9O75884 186 aa14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 HLA-DRB1P01911 266 aa14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 THBS3P49746 956 aa14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 CENPVQ7Z7K6 275 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 FBXL15Q9H469 300 aa14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 SCPEP1Q9HB40 452 aa14.38□□□□□ -0.11
PDLIM7-216ENST00000506537 PSMB11A5LHX3 300 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 RRHO14718 337 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 RGS5O15539 181 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 PPYP01298 95 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 RFX2P48378 723 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 EIF4EBP1Q13541 118 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 ZNF660Q6AZW8 331 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 OVCH2Q7RTZ1 564 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 ZNF329Q86UD4 541 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 LYSMD2Q8IV50 215 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 FOXRED2Q8IWF2 684 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 STPG2Q8N412 459 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 EHFQ9NZC4 300 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 KIAA1456Q9P272 454 aa14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 RBMX2Q9Y388 322 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-216ENST00000506537 IGHV7-81A0A0B4J1V7 117 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 AP4M1O00189 453 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 KCNAB3O43448 404 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 PMP2P02689 132 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 RPL30P62888 115 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 NDPQ00604 133 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 CD83Q01151 205 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 PSG5Q15238 335 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 C2orf68Q2NKX9 166 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 RNASE12Q5GAN4 147 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 BVESQ8NE79 360 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 CHPT1Q8WUD6 406 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 SECTM1Q8WVN6 248 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 GIMAP1Q8WWP7 306 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 ABHD1Q96SE0 405 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 RNF5Q99942 180 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 TPSG1Q9NRR2 321 aa14.36□□□□□ -0.11
PDLIM7-216ENST00000506537 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 SULT1C2O00338 296 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 WIPF1O43516 503 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 SLC22A5O76082 557 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 IGLV2-23P01705 113 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 HLA-DMAP28067 261 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 HRH1P35367 487 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 TAS2R46P59540 309 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 RPS16P62249 146 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 CFHR3Q02985 330 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 DYRK1AQ13627 763 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 NSUN5P1Q3KNT7 163 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 TREML4Q6UXN2 200 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 OR5H2Q8NGV7 314 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 OR52I2Q8NH67 350 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 FLYWCH2Q96CP2 140 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 ADTRPQ96IZ2 230 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 GPHA2Q96T91 129 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 NXF2Q9GZY0 626 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 CCL28Q9NRJ3 127 aa14.35□□□□□ -0.11
PDLIM7-216ENST00000506537 FCN1O00602 326 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 ATP6V0E1O15342 81 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 PLXNB1O43157 2135 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 SPDEFO95238 335 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 IGF1P05019 195 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 RCVRNP35243 200 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 FXYD4P59646 89 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 TAGLNQ01995 201 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 RTL8BQ17RB0 113 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 TMEM177Q53S58 311 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 LIN54Q6MZP7 749 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 KCTD9Q7L273 389 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 NDUFA11Q86Y39 141 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 OR4X2Q8NGF9 303 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 HARBI1Q96MB7 349 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 TSNAXQ99598 290 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 C6orf62Q9GZU0 229 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 OR51J1Q9H342 316 aa14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 METTL1Q9UBP6 276 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-216ENST00000506537 SRRM4A7MD48 611 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 SLC25A17O43808 307 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 TPPPO94811 219 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 CSF1P09603 554 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 RRASP10301 218 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 PLGLAQ15195 96 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 MSMO1Q15800 293 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 DHRS11Q6UWP2 260 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 TMEM17Q86X19 198 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 ZNF2Q9BSG1 426 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 DCUN1D5Q9BTE7 237 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 SLC5A7Q9GZV3 580 aa14.33□□□□□ -0.12
PDLIM7-216ENST00000506537 FXYD6Q9H0Q3 95 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms