RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CEND1Q8N111 149 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 CBR4Q8N4T8 237 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 C14orf178Q8N769 122 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 NOXO1Q8NFA2 376 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 OR4K15Q8NH41 348 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF596Q8TC21 504 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 SLC7A6Q92536 515 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 AP3S1Q92572 193 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 STARD4Q96DR4 205 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 SLC25A44Q96H78 314 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 CYYR1Q96J86 154 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 PACRGQ96M98 296 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 TSPAN32Q96QS1 320 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 OR2M2Q96R28 347 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 MBOAT4Q96T53 435 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 NIPSNAP3BQ9BS92 247 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 PAK1IP1Q9NWT1 392 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 METTL1Q9UBP6 276 aaKnown RBP3.95□□□□□ -1.78
NIPBL-205ENST00000505998 NBPF19A0A087WUL8 3843 aa3.95□□□□□ -1.78
NIPBL-205ENST00000505998 HEATR1Q9H583 2144 aaKnown RBP3.94□□□□□ -1.78
NIPBL-205ENST00000505998 TRAV27A0A087WT01 109 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 LOC100131303A0A0U1RQF7 123 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 PRSS37A4D1T9 235 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 LALBAP00709 142 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 METTL15P1P0C7V9 234 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF43P17038 809 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 GABRR1P24046 479 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 DDTP30046 118 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 FMO3P31513 532 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 OTX1P32242 354 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-205ENST00000505998 GGT2P36268 569 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 UQCRFS1P47985 274 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 PRKXP51817 358 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 UBE2G2P60604 165 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 SNRPGP62308 76 aaKnown RBP3.94□□□□□ -1.78
NIPBL-205ENST00000505998 RAP1AP62834 184 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 HIST1H3AP68431 136 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 ECH1Q13011 328 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 MAB21L1Q13394 359 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 GGTLC2Q14390 218 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 PTGES3Q15185 160 aaKnown RBP3.94□□□□□ -1.78
NIPBL-205ENST00000505998 GUK1Q16774 197 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 C5orf64Q2M2E5 130 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 TIGITQ495A1 244 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 HIKESHIQ53FT3 197 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 AVPI1Q5T686 147 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 HIST2H3PS2Q5TEC6 136 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 LPCAT3Q6P1A2 487 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 TEX261Q6UWH6 196 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 HIST2H3AQ71DI3 136 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 SLC35D2Q76EJ3 337 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 C17orf78Q8N4C9 275 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF283Q8N7M2 679 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 ITLN2Q8WWU7 325 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-205ENST00000505998 MRGPRFQ96AM1 343 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 HYLS1Q96M11 299 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 Q96M85 177 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF75AQ96N20 296 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 ANKRD60Q9BZ19 345 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 Q9H3A6 140 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 ISG20L2Q9H9L3 353 aaKnown RBP3.94□□□□□ -1.78
NIPBL-205ENST00000505998 OR1A1Q9P1Q5 309 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 U3KQ87 197 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 UNC79Q9P2D8 2635 aa3.94□□□□□ -1.78
NIPBL-205ENST00000505998 ARFGEF3Q5TH69 2177 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 TANC2Q9HCD6 1990 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 IGHV3-15A0A0B4J1V0 119 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 IGHV7-81A0A0B4J1V7 117 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 IGKV1D-43A0A0B4J1Z2 117 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 A0A1B0GW55 424 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 H0Y9J4 135 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 J3QRE1 110 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 DCTN6O00399 190 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 GNGT2O14610 69 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 SOX14O95416 240 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 IGHV3-23P01764 117 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 DUX4L2P0CJ85 424 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 DUX4L3P0CJ86 424 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 DUX4L5P0CJ88 424 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 DUX4L6P0CJ89 424 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 DUX4L7P0CJ90 424 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 NQO2P16083 231 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 HIST1H1CP16403 213 aaKnown RBP3.93□□□□□ -1.78
NIPBL-205ENST00000505998 CTLA4P16410 223 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF25P17030 456 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-205ENST00000505998 SRMP19623 302 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 PVALBP20472 110 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-205ENST00000505998 MSR1P21757 451 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 HLA-DMAP28067 261 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 GTF2E2P29084 291 aaKnown RBP3.93□□□□□ -1.78
NIPBL-205ENST00000505998 S100A11P31949 105 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 POLR2IP36954 125 aaKnown RBP3.93□□□□□ -1.78
NIPBL-205ENST00000505998 RIPPLY3P57055 190 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 OR8G1Q15617 311 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 PHYHD1Q5SRE7 291 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 TSPO2Q5TGU0 170 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 FAM27BQ5VT28 67 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 ZNF691Q5VV52 312 aa3.93□□□□□ -1.78
NIPBL-205ENST00000505998 NXNL2Q5VZ03 156 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms