RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GAPDHP04406 335 aaKnown RBP15.65■□□□□ 0.1
USP39-218ENST00000493829 SRP14P37108 136 aaKnown RBP15.65■□□□□ 0.1
USP39-218ENST00000493829 TAS2R31P59538 309 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 SLC9A3R2Q15599 337 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 MSMO1Q15800 293 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 SP6Q3SY56 376 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 SLC25A42Q86VD7 318 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 HSD17B10Q99714 261 aaKnown RBP15.65■□□□□ 0.1
USP39-218ENST00000493829 NABP2Q9BQ15 211 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 NAA60Q9H7X0 242 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 GAB2Q9UQC2 676 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 HIVEP1P15822 2718 aa15.65■□□□□ 0.1
USP39-218ENST00000493829 A0A1W2PPI3 338 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 CRYM-AS1A6NIL9 109 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 TIMM23O14925 209 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 FOSL1P15407 271 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 RND3P61587 244 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 CATR1Q13166 79 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 FAM71F2Q6NXP2 309 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 SGPP2Q8IWX5 399 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 CASTOR1Q8WTX7 329 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 TP53RKQ96S44 253 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 MARVELD1Q9BSK0 173 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 FAM96BQ9Y3D0 163 aa15.64■□□□□ 0.09
USP39-218ENST00000493829 C3orf85A0A1B0GTC6 90 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 HLA-AP01891 365 aaKnown RBP15.63■□□□□ 0.09
USP39-218ENST00000493829 OR5AC1P0C628 307 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 OR4E1P0C645 316 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 CD24P25063 80 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 THBS3P49746 956 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 SUPT4H1P63272 117 aaKnown RBP15.63■□□□□ 0.09
USP39-218ENST00000493829 ZNF816Q0VGE8 651 aaPredicted RBP15.63■□□□□ 0.09
USP39-218ENST00000493829 ZNF66Q6ZN08 573 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 RNF212BA8MTL3 300 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 H7C2Y5 167 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 RAMP3O60896 148 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 FCGR3BO75015 233 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 F2RP25116 425 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 UBE2MP61081 183 aaKnown RBP15.63■□□□□ 0.09
USP39-218ENST00000493829 TMEM128Q5BJH2 165 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 MINDY2Q8NBR6 621 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 MALSU1Q96EH3 234 aa15.63■□□□□ 0.09
USP39-218ENST00000493829 LIN7CQ9NUP9 197 aaKnown RBP15.63■□□□□ 0.09
USP39-218ENST00000493829 A0A0B4J293 547 aa15.62■□□□□ 0.09
USP39-218ENST00000493829 TXNL1O43396 289 aa15.62■□□□□ 0.09
USP39-218ENST00000493829 HNF1AP20823 631 aa15.62■□□□□ 0.09
USP39-218ENST00000493829 SPAG16Q8N0X2 631 aa15.62■□□□□ 0.09
USP39-218ENST00000493829 H0YJW9 148 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 RAB13P51153 203 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 CBX3Q13185 183 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 DHRS2Q13268 280 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 TATDN3Q17R31 274 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 CCDC144NLQ6NUI1 221 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 DDB2Q92466 427 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 ADTRPQ96IZ2 230 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 SLC35D1Q9NTN3 355 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 PRELID3BQ9Y3B1 194 aa15.61■□□□□ 0.09
USP39-218ENST00000493829 C9orf170A2RU37 121 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 H0Y980 276 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 DHFRP00374 187 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 IFNA2P01563 188 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 APOA2P02652 100 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 BRWD1-AS2P59051 145 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 DEFB112Q30KQ8 113 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 LIN54Q6MZP7 749 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 LYG2Q86SG7 212 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 OR8H3Q8N146 312 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 OOSP1A8MZH6 123 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 SFT2D2O95562 160 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 CRYZL1O95825 349 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 FBP1P09467 338 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 MECP2P51608 486 aaKnown RBP15.6■□□□□ 0.09
USP39-218ENST00000493829 DHODHQ02127 395 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 FBLN7Q53RD9 439 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 TEX29Q8N6K0 151 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 CFHR4Q92496 578 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 ALG5Q9Y673 324 aa15.6■□□□□ 0.09
USP39-218ENST00000493829 SONP18583 2426 aaKnown RBP15.59■□□□□ 0.09
USP39-218ENST00000493829 IGKV1-16P04430 117 aa15.59■□□□□ 0.09
USP39-218ENST00000493829 RTL8BQ17RB0 113 aa15.59■□□□□ 0.09
USP39-218ENST00000493829 OR5AN1Q8NGI8 311 aa15.59■□□□□ 0.09
USP39-218ENST00000493829 KCNIP3Q9Y2W7 256 aa15.59■□□□□ 0.09
USP39-218ENST00000493829 WASHC3Q9Y3C0 194 aa15.59■□□□□ 0.09
USP39-218ENST00000493829 hCG_2014768A0A024R1R8 64 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 INAFM1C9JVW0 142 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 S1PR2O95136 353 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 IGKV1D-33P01593 117 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 IGKV1-33P01594 117 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 SERPINE2P07093 398 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 SNRNP70P08621 437 aaKnown RBP15.58■□□□□ 0.08
USP39-218ENST00000493829 ANXA3P12429 323 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 RPA2P15927 270 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 LPAR6P43657 344 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 ARHGDIBP52566 201 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 RAG2P55895 527 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 BPIFB3P59826 476 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 HES1Q14469 280 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 HNF4GQ14541 408 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 ANKRD55Q3KP44 614 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 C11orf88Q6PI97 169 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms