RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SLC25A48Q6ZT89 311 aaKnown RBP10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 TMEM17Q86X19 198 aa10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 LYSMD2Q8IV50 215 aa10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 LINC00311Q8N616 119 aa10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 C5orf56Q8N8D9 126 aa10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 TMEM229BQ8NBD8 167 aa10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 ZNF439Q8NDP4 499 aa10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 WDR12Q9GZL7 423 aaKnown RBP10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 SRRQ9GZT4 340 aa10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 ZNF221Q9UK13 617 aa10.05□□□□□ -0.8
SEC61A1-206ENST00000491668 M0QYG6 137 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 HSD17B6O14756 317 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 ST8SIA5O15466 376 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 RAB3DO95716 219 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 OR8U9P0C7N5 309 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 AKAIN1P0CW23 69 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 LUMP51884 338 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 HERV-K104P61576 105 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 ZNF816Q0VGE8 651 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 EBI3Q14213 229 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 HNF4GQ14541 408 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 CT45A1Q5HYN5 189 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 LY6G6FQ5SQ64 297 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 STEAP1BQ6NZ63 245 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 CENPVQ7Z7K6 275 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 H1FOOQ8IZA3 346 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 OR8H3Q8N146 312 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 TOMM5Q8N4H5 51 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 Q8N6K4 173 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 C8orf31Q8N9H6 132 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 OR6F1Q8NGZ6 308 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 OR8U1Q8NH10 309 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 CT45A3Q8NHU0 189 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 OR4F4Q96R69 305 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 C11orf54Q9H0W9 315 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 AKIP1Q9NQ31 210 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 ZNF107Q9UII5 783 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 RNF150Q9ULK6 438 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 OR2W1Q9Y3N9 320 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
SEC61A1-206ENST00000491668 IGHV3-72A0A0B4J1Y9 119 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 IGHV1-3A0A0C4DH29 117 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 LINC01548A6NM66 108 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 M0QZK8 103 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 ITGB1BP1O14713 200 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 RAB29O14966 203 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 LANCL1O43813 399 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 IGKV1D-33P01593 117 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 IGKV1-33P01594 117 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 FAUP35544 74 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 GPR12P47775 334 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 FXYD4P59646 89 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 DYRK1AQ13627 763 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 MEF2DQ14814 521 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 C9orf152Q5JTZ5 239 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 OVCH2Q7RTZ1 564 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 MFSD4AQ8N468 514 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 WFDC9Q8NEX5 89 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 NOL4LQ96MY1 436 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 S1PR3Q99500 378 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 ZNF2Q9BSG1 426 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 TINAGL1Q9GZM7 467 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 PARP12Q9H0J9 701 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 OR2D2Q9H210 308 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 GHITMQ9H3K2 345 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 PLSCR3Q9NRY6 295 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 MCUBQ9NWR8 336 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 PIPOXQ9P0Z9 390 aa10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-206ENST00000491668 LINC00854A0A1B0GVQ3 168 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 ANKRD20A5PA0PJZ0 165 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 DISC1C4P0D8 188 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 GAPDHP04406 335 aaKnown RBP10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 TMEM11P17152 192 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 AADACP22760 399 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 PPP5CP53041 499 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 HES1Q14469 280 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 SCGB2B2Q4G0G5 96 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 VAX1Q5SQQ9 334 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 ZNF329Q86UD4 541 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 ARRDC1Q8N5I2 433 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 SECTM1Q8WVN6 248 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 GIMAP1Q8WWP7 306 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 RTN4IP1Q8WWV3 396 aaPredicted RBP10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 ABHD14BQ96IU4 210 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 EAF1Q96JC9 268 aaPredicted RBP10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 CCDC32Q9BV29 185 aa10.02□□□□□ -0.81
SEC61A1-206ENST00000491668 FGF16O43320 207 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 SLC22A5O76082 557 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 PPYP01298 95 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 CD74P04233 296 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 IL7P13232 177 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 CD40LGP29965 261 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 ZNF137PP52743 207 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 BAK1Q16611 211 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 DHRS11Q6UWP2 260 aa10.01□□□□□ -0.81
SEC61A1-206ENST00000491668 MOB3BQ86TA1 216 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms