RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ZNF585BQ52M93 769 aa9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 SLC25A30Q5SVS4 291 aa9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 ZNF554Q86TJ5 538 aa9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 CD300LFQ8TDQ1 290 aa9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 CCDC140Q96MF4 163 aa9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 SPAG8Q99932 426 aaPredicted RBP9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 RNF126Q9BV68 326 aa9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 STEAP1Q9UHE8 339 aa9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 EXOSC1Q9Y3B2 195 aaKnown RBP9.96□□□□□ -0.82
EXOSC3-207ENST00000490516 ZAR1LA6NP61 321 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 J3QLW9 94 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 SLC16A6O15403 523 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 MPPED1O15442 326 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 ZNF19P17023 458 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 ARL3P36405 182 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 MNAT1P51948 309 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 TNP2Q05952 138 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 ZNF124Q15973 351 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 FAM106AQ4KMX7 169 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 C1orf134Q5TEV5 83 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 PDPNQ86YL7 162 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 APRG1Q8IVJ8 170 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 ADGRG5Q8IZF4 528 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 NECAP1Q8NC96 275 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 AGMATQ9BSE5 352 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 HRH4Q9H3N8 390 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 PAK1IP1Q9NWT1 392 aaPredicted RBP9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 S4R3C0 116 aa9.95□□□□□ -0.82
EXOSC3-207ENST00000490516 CA11O75493 328 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 GPX5O75715 221 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 BAG2O95816 211 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 FAM107AO95990 144 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 C8orf88P0DMB2 117 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 ZNF93P35789 620 aaPredicted RBP9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 MAP2K4P45985 399 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 SOX2P48431 317 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 HMGN3Q15651 99 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 DDI2Q5TDH0 399 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 CLEC19AQ6UXS0 136 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 UNQ9165/PRO28630Q6UXU0 137 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 Q6ZRM9 215 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 C4orf36Q96KX1 117 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 PDCD1LG2Q9BQ51 273 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 JAM3Q9BX67 310 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 GMPPBQ9Y5P6 360 aa9.94□□□□□ -0.82
EXOSC3-207ENST00000490516 DAPL1A0PJW8 107 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 EPM2AB3EWF7 344 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 ZNF780AO75290 641 aaPredicted RBP9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 APOA2P02652 100 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 AMBPP02760 352 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 MED21Q13503 144 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 TNXAQ16473 311 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 SIGIRRQ6IA17 410 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 OR4A47Q6IF82 309 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 SRSF12Q8WXF0 261 aaKnown RBP9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 DNAJC9Q8WXX5 260 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 CHRDL1Q9BU40 450 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 SCRT1Q9BWW7 348 aa9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 ISG20L2Q9H9L3 353 aaKnown RBP9.93□□□□□ -0.82
EXOSC3-207ENST00000490516 NACAE9PAV3 2078 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 TSPAN4O14817 238 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 RBMY1A1P0DJD3 496 aaKnown RBP9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 RBMY1CP0DJD4 496 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 FAM209BQ5JX69 171 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 C19orf35Q6ZS72 473 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 Q8NAQ8 132 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 SETD9Q8NE22 299 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 OR5AK2Q8NH90 309 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 CANT1Q8WVQ1 401 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 OR14A2Q96R54 314 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 C11orf54Q9H0W9 315 aaPredicted RBP9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 BANF2Q9H503 90 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 C5orf66Q9H5L9 145 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 SLC35D1Q9NTN3 355 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 ARL8BQ9NVJ2 186 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 ABRACLQ9P1F3 81 aa9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 SRRM2Q9UQ35 2752 aaKnown RBP9.92□□□□□ -0.82
EXOSC3-207ENST00000490516 DNAH5Q8TE73 4624 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 TMEM212A6NML5 194 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 SRRM4A7MD48 611 aaKnown RBP9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 E9PI62 339 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 IFNA10P01566 189 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 RPSAP08865 295 aaKnown RBP9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 FUT3P21217 361 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 ADMP35318 185 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 ORAI1Q96D31 301 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 HARBI1Q96MB7 349 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 C6orf62Q9GZU0 229 aaPredicted RBP9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 RIBC2Q9H4K1 309 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 TMEM138Q9NPI0 162 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 MRPL27Q9P0M9 148 aaKnown RBP9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 RPL36Q9Y3U8 105 aaKnown RBP9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 LRRC42Q9Y546 428 aa9.91□□□□□ -0.82
EXOSC3-207ENST00000490516 J3QRE1 110 aa9.9□□□□□ -0.82
EXOSC3-207ENST00000490516 CA1P00915 261 aaPredicted RBP9.9□□□□□ -0.82
EXOSC3-207ENST00000490516 IDO2Q6ZQW0 420 aa9.9□□□□□ -0.82
EXOSC3-207ENST00000490516 UBE2DNLQ8IWF7 75 aa9.9□□□□□ -0.82
EXOSC3-207ENST00000490516 TTC9CQ8N5M4 171 aa9.9□□□□□ -0.82
EXOSC3-207ENST00000490516 ACOT12Q8WYK0 555 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms