RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 GFRA1P56159 465 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 ARG2P78540 354 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 PSG4Q00888 419 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 RSPO4Q2I0M5 234 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 LRRC10Q5BKY1 277 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 RAET1LQ5VY80 246 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 BRICD5Q6PL45 260 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 SELENOHQ8IZQ5 122 aaKnown RBP9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 MUC15Q8N387 334 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 RPP25LQ8N5L8 163 aaKnown RBP9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 SLC25A22Q9H936 323 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 C19orf25Q9UFG5 118 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 KIAA1549Q9HCM3 1950 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 MED12Q93074 2177 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 NRASP01111 189 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 FUT6P51993 359 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 RBM11P57052 281 aaKnown RBP9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 LCN12Q6JVE5 192 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 HAPLN4Q86UW8 402 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 ZNF295-AS1Q8N0V1 137 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 ZC2HC1AQ96GY0 325 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 LRFN3Q9BTN0 628 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 DEFB126Q9BYW3 111 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 UBE2ZQ9H832 354 aaPredicted RBP9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 C22orf46C9J442 243 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 KRASP01116 189 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 CYC1P08574 325 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 FRMD6-AS1P0C7T7 363 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 GNRHRP30968 328 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 LGALS7P47929 136 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 ARF6P62330 175 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 ARL16Q0P5N6 197 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 SRSF7Q16629 238 aaKnown RBP eCLIP9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 SLC25A45Q8N413 288 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 ZNF114Q8NC26 417 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 OR1F12Q8NHA8 337 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 GNB4Q9HAV0 340 aa9.8□□□□□ -0.84
SEC61A1-205ENST00000483956 G3V3Y1 287 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 SCRG1O75711 98 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 TOX4O94842 621 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 NMSQ5H8A3 153 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 UCN2Q96RP3 112 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 PSMG3Q9BT73 122 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 IGHV3-15A0A0B4J1V0 119 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 PAGE4O60829 102 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 MYF5P13349 255 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 RELBQ01201 579 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 DAZAP2Q15038 168 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 MPV17L2Q567V2 206 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 TBC1D26Q86UD7 250 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 PNKDQ8N490 385 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 OR5B3Q8NH48 314 aa9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 ZNF837Q96EG3 531 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 NEIL1Q96FI4 390 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-205ENST00000483956 hCG_38984A0A1B0GV85 526 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 RBFOX2O43251 390 aaKnown RBP eCLIP9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 GNG7O60262 68 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 RAB30Q15771 203 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 ACSF3Q4G176 576 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 WDR5BQ86VZ2 330 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 ZNF525Q8N782 197 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 OR5P3Q8WZ94 311 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 RCHY1Q96PM5 261 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 DERL1Q9BUN8 251 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 EML6Q6ZMW3 1958 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FRYLO94915 3013 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A10PA6NDY2 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A18PA6NE21 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A16PA6NEW6 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A20PA6NIJ5 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A8PA6NJQ4 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A7PA6NKC0 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A22PA8MWA6 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 KIAA1324LA8MWY0 1029 aaPredicted RBP9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A12PA8MX19 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A5PA8MXJ8 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A23PA8MXZ1 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 DLL1O00548 723 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A15PP0C7V4 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A13PP0C7W8 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A14PP0C7W9 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FAM90A24PP0C7X0 464 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 UCP1P25874 307 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 SERF2P84101 59 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 RBPJQ06330 500 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 Q0VG73 95 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 OR10V1Q8NGI7 309 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 ZNF442Q9H7R0 627 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 SLC7A10Q9NS82 523 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 TAAR3PQ9P1P4 343 aa9.78□□□□□ -0.84
SEC61A1-205ENST00000483956 FCN1O00602 326 aa9.77□□□□□ -0.84
SEC61A1-205ENST00000483956 RAB29O14966 203 aa9.77□□□□□ -0.84
SEC61A1-205ENST00000483956 DNPH1O43598 174 aa9.77□□□□□ -0.84
SEC61A1-205ENST00000483956 CRYAAP02489 173 aa9.77□□□□□ -0.84
SEC61A1-205ENST00000483956 LIFP15018 202 aa9.77□□□□□ -0.84
SEC61A1-205ENST00000483956 VDAC1P21796 283 aa9.77□□□□□ -0.84
SEC61A1-205ENST00000483956 PRRX1P54821 245 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms