RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	KCTD9	Q7L273	389 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	LYSMD2	Q8IV50	215 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	LAX1	Q8IWV1	398 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	CMTM1	Q8IZ96	169 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	SLC38A6	Q8IZM9	456 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	PRR18	Q8N4B5	295 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	GDPD1	Q8N9F7	314 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525		Q8N9W7	124 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	TEX45	Q8NA69	505 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR5H2	Q8NGV7	314 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR6F1	Q8NGZ6	308 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR4S2	Q8NH73	311 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR56B4	Q8NH76	319 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR4A5	Q8NH83	315 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	SGMS2	Q8NHU3	365 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	CHPT1	Q8WUD6	406 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	DIRAS2	Q96HU8	199 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	ABHD1	Q96SE0	405 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	PRRT1	Q99946	306 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	C7orf50	Q9BRJ6	194 aa	Known RBP	4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	SRSF8	Q9BRL6	282 aa	Known RBP	4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	ST6GALNAC5	Q9BVH7	336 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR2D2	Q9H210	308 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF702P	Q9H963	129 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	PLEKHA2	Q9HB19	425 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	SERTAD4	Q9NUC0	356 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	SDHAF2	Q9NX18	166 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	COMMD9	Q9P000	198 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR1A1	Q9P1Q5	309 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	EXTL2	Q9UBQ6	330 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	HILPDA	Q9Y5L2	63 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525		V9GYH0	126 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGHV3-43	A0A0B4J1X8	118 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	TRAV39	A0A0B4J263	110 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	ANKRD20A5P	A0PJZ0	165 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	SMIM30	A4D0T7	59 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	DPPA5	A6NC42	116 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	NAP1L6	A6NFF2	107 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	FABP12	A6NFH5	140 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAM25A	B3EWG3	89 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAM25C	B3EWG5	89 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAM25G	B3EWG6	89 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	CTDSP2	O14595	271 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	RRH	O14718	337 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	ARPC1B	O15143	372 aa	Known RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	BET1	O15155	118 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGKV1D-33	P01593	117 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGKV1-33	P01594	117 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	FCER2	P06734	321 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	IL6R	P08887	468 aa	Predicted RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR8U9	P0C7N5	309 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGHV3-43D	P0DP04	118 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	FCGR2C	P31995	323 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	HRH1	P35367	487 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	DLX1	P56177	255 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	TAS2R31	P59538	309 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	UBE2M	P61081	183 aa	Known RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	UBE2K	P61086	200 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	C5orf64	Q2M2E5	130 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	AARD	Q4LEZ3	155 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	AKIRIN2	Q53H80	203 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	C19orf54	Q5BKX5	351 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	RNASE10	Q5GAN6	216 aa	Known RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	PRR31	Q5SQ13	230 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	AADACL3	Q5VUY0	350 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	C12orf54	Q6X4T0	127 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	FOXRED2	Q8IWF2	684 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	PDZD9	Q8IXQ8	264 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	GVQW1	Q8N7I0	195 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF383	Q8NA42	475 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR6Q1	Q8NGQ2	317 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR8U1	Q8NH10	309 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	TERB2	Q8NHR7	220 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	SETD6	Q8TBK2	473 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	MYOZ3	Q8TDC0	251 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	S100Z	Q8WXG8	99 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	TRIM63	Q969Q1	353 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	FLYWCH2	Q96CP2	140 aa	Known RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	SCGB3A2	Q96PL1	93 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	ATP6V0B	Q99437	205 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	MDFI	Q99750	246 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	RSRP1	Q9BUV0	290 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	MRPL20	Q9BYC9	149 aa	Known RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZFP57	Q9NU63	452 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	ING3	Q9NXR8	418 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	BET1L	Q9NYM9	111 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	EHF	Q9NZC4	300 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	PTTG2	Q9NZH5	202 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	KIAA1456	Q9P272	454 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	ELF5	Q9UKW6	265 aa	Predicted RBP	4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	RNF150	Q9ULK6	438 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	RNF114	Q9Y508	228 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	DNHD1	Q96M86	4753 aa		4.04	□□□□□ -1.76
HDAC6-223	ENST00000480525	NBEAL1	Q6ZS30	2694 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	MEX3A	A1L020	520 aa	Known RBP	4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAM172BP	A6NC97	362 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 1405.4 ms