RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 NXF2Q9GZY0 626 aaKnown RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 RBM38Q9H0Z9 239 aaKnown RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 MMP27Q9H306 513 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 ZNF702PQ9H963 129 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 KIAA1456Q9P272 454 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 ZNF580Q9UK33 172 aa6.83□□□□□ -1.32
SSBP1-208ENST00000469123 MRPS7Q9Y2R9 242 aaKnown RBP6.83□□□□□ -1.32
SSBP1-208ENST00000469123 IGKV1D-8A0A087WSZ0 117 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 NCBP2LA6PVI3 153 aaKnown RBP6.82□□□□□ -1.32
SSBP1-208ENST00000469123 H0YJW9 148 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 M0R1X1 148 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 CTDSPLO15194 276 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 NBR2O15453 112 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 CT45A6P0DMU7 189 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 CT45A5P0DMU8 189 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 CT45A7P0DMV0 189 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 CD24P25063 80 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 PTBP1P26599 531 aaKnown RBP eCLIP6.82□□□□□ -1.326e-6■■□□□ 11.7
SSBP1-208ENST00000469123 S100GP29377 79 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 LGALS7P47929 136 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 DYRK1AQ13627 763 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 MMDQ15546 238 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 ABCA11PQ4W5N1 156 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 RPL39P5Q59GN2 51 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 LPCAT3Q6P1A2 487 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 OVCH2Q7RTZ1 564 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 SNX29P2Q8IUI4 249 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 FOXRED2Q8IWF2 684 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 GVQW1Q8N7I0 195 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 NPBQ8NG41 125 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 MCFD2Q8NI22 146 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 FCAMRQ8WWV6 532 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 SNAPC3Q92966 411 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 DIRAS2Q96HU8 199 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 ABHD14BQ96IU4 210 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 TSNAXQ99598 290 aaKnown RBP6.82□□□□□ -1.32
SSBP1-208ENST00000469123 PARP12Q9H0J9 701 aaKnown RBP6.82□□□□□ -1.32
SSBP1-208ENST00000469123 SDHAF2Q9NX18 166 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 TAS2R8Q9NYW2 309 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 EHFQ9NZC4 300 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 PRELID3BQ9Y3B1 194 aa6.82□□□□□ -1.32
SSBP1-208ENST00000469123 IGHV3-72A0A0B4J1Y9 119 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 GABARAPH6UMI1 98 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 H7C2Y5 167 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 AP4M1O00189 453 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 CREBL2O60519 120 aaPredicted RBP6.81□□□□□ -1.32
SSBP1-208ENST00000469123 NDUFA3O95167 84 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 PPYP01298 95 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 IGHG2P01859 326 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 NFYAP23511 347 aaPredicted RBP6.81□□□□□ -1.32
SSBP1-208ENST00000469123 FCGR2CP31995 323 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 KIR2DS2P43631 304 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 HERV-K104P61576 105 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 BLCAPP62952 87 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 DCTN2Q13561 401 aaKnown RBP6.81□□□□□ -1.32
SSBP1-208ENST00000469123 HNF4GQ14541 408 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 VAX1Q5SQQ9 334 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 DHRS11Q6UWP2 260 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 FAM131AQ6UXB0 335 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 ZNF66Q6ZN08 573 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 C5orf24Q7Z6I8 188 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 TMEM17Q86X19 198 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 LAX1Q8IWV1 398 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 FAM71E2Q8N5Q1 922 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 COMMD1Q8N668 190 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 Q8N9W7 124 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 CD300LFQ8TDQ1 290 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 CHPT1Q8WUD6 406 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 FLYWCH2Q96CP2 140 aaKnown RBP6.81□□□□□ -1.32
SSBP1-208ENST00000469123 CITED1Q99966 193 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 WNT10AQ9GZT5 417 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 SLC35D1Q9NTN3 355 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 PTTG2Q9NZH5 202 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 MTFP1Q9UDX5 166 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 RNF150Q9ULK6 438 aa6.81□□□□□ -1.32
SSBP1-208ENST00000469123 RBMX2Q9Y388 322 aaKnown RBP6.81□□□□□ -1.32
SSBP1-208ENST00000469123 TNCP24821 2201 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 WNK1Q9H4A3 2382 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 ZNF736B4DX44 427 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-208ENST00000469123 CTDSP2O14595 271 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 HLA-DRB1P01911 266 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 AMY1AP04745 511 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 AMY2AP04746 511 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 IFNA6P05013 189 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 CSF1P09603 554 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 AADACP22760 399 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 DUTP33316 252 aaKnown RBP6.8□□□□□ -1.32
SSBP1-208ENST00000469123 HRH1P35367 487 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 ECI1P42126 302 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 TAS2R19P59542 299 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 TSPAN5P62079 268 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 POLR2GP62487 172 aaKnown RBP eCLIP6.8□□□□□ -1.32
SSBP1-208ENST00000469123 SLC35B1P78383 322 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 CD83Q01151 205 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 CATR1Q13166 79 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 IL18Q14116 193 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 C5orf64Q2M2E5 130 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 TET2Q6N021 2002 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-208ENST00000469123 SLC35E3Q7Z769 313 aa6.8□□□□□ -1.32
SSBP1-208ENST00000469123 CMTM1Q8IZ96 169 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms