RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZNF66Q6ZN08 573 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 ZNF818PQ6ZRF7 136 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 SLC38A6Q8IZM9 456 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 ZNF383Q8NA42 475 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 BVESQ8NE79 360 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 OR2T10Q8NGZ9 312 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 HSD17B10Q99714 261 aaKnown RBP12.82□□□□□ -0.36
GPC1-207ENST00000466624 RSRP1Q9BUV0 290 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 HRASLSQ9HDD0 168 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 SCP2D1Q9UJQ7 156 aa12.82□□□□□ -0.36
GPC1-207ENST00000466624 IGHV3-72A0A0B4J1Y9 119 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 GPR31O00270 319 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 GPR137BO60478 399 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 OR2F2O95006 317 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 MOSP00540 346 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 IGKV1D-33P01593 117 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 IGKV1-33P01594 117 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 APOA2P02652 100 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 SURF2Q15527 256 aaPredicted RBP12.81□□□□□ -0.36
GPC1-207ENST00000466624 LY6EQ16553 131 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 SCGB2B2Q4G0G5 96 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 CCBE1Q6UXH8 406 aaPredicted RBP12.81□□□□□ -0.36
GPC1-207ENST00000466624 PDPNQ86YL7 162 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 Q8N6K4 173 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 DDB2Q92466 427 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 ZNF486Q96H40 463 aaPredicted RBP12.81□□□□□ -0.36
GPC1-207ENST00000466624 EAF1Q96JC9 268 aaPredicted RBP12.81□□□□□ -0.36
GPC1-207ENST00000466624 RBM14Q96PK6 669 aaKnown RBP12.81□□□□□ -0.36
GPC1-207ENST00000466624 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 RNF5Q99942 180 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 C7orf50Q9BRJ6 194 aaKnown RBP12.81□□□□□ -0.36
GPC1-207ENST00000466624 WASHC3Q9Y3C0 194 aa12.81□□□□□ -0.36
GPC1-207ENST00000466624 C2CD3Q4AC94 2353 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 NAP1L6A6NFF2 107 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 LINC00473A8K010 186 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 RRASP10301 218 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 TMEM11P17152 192 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 CD24P25063 80 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 HES1Q14469 280 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 GLDNQ6ZMI3 551 aaPredicted RBP12.8□□□□□ -0.36
GPC1-207ENST00000466624 KCTD9Q7L273 389 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 CMTM1Q8IZ96 169 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 DRAXINQ8NBI3 349 aaPredicted RBP12.8□□□□□ -0.36
GPC1-207ENST00000466624 OR8H1Q8NGG4 311 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 OR51S1Q8NGJ8 323 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 TNFRSF19Q9NS68 423 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 MCUBQ9NWR8 336 aa12.8□□□□□ -0.36
GPC1-207ENST00000466624 S100GP29377 79 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 CATR1Q13166 79 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 FBLN7Q53RD9 439 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 IDO2Q6ZQW0 420 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 OR13C8Q8NGS7 320 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 ZFAND1Q8TCF1 268 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 MRGPRFQ96AM1 343 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 SLC25A33Q9BSK2 321 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 SLC35D1Q9NTN3 355 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 PRELID3BQ9Y3B1 194 aa12.79□□□□□ -0.36
GPC1-207ENST00000466624 CENPXA8MT69 81 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 RNF212BA8MTL3 300 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 H7C2Y5 167 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 M0QZK8 103 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 FGF16O43320 207 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 CHST1O43916 411 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 KIR2DS2P43631 304 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 LINC00205P59089 165 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 RND3P61587 244 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 RPL30P62888 115 aaKnown RBP12.78□□□□□ -0.36
GPC1-207ENST00000466624 CBX3Q13185 183 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 RTL8BQ17RB0 113 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 DHRS7BQ6IAN0 325 aaPredicted RBP12.78□□□□□ -0.36
GPC1-207ENST00000466624 TMEM219Q86XT9 240 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 OR4C13Q8NGP0 309 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 MOB4Q9Y3A3 225 aa12.78□□□□□ -0.36
GPC1-207ENST00000466624 FAM181BA6NEQ2 426 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 RBFOX2O43251 390 aaKnown RBP eCLIP12.77□□□□□ -0.37
GPC1-207ENST00000466624 PGLYRP1O75594 196 aaPredicted RBP12.77□□□□□ -0.37
GPC1-207ENST00000466624 UPK1BO75841 260 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 CTSDP07339 412 aaPredicted RBP12.77□□□□□ -0.37
GPC1-207ENST00000466624 PGAM2P15259 253 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 TMEM177Q53S58 311 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 TCTEX1D1Q8N7M0 179 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 MARCH1Q8TCQ1 289 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 TCTEX1D2Q8WW35 142 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 FLYWCH2Q96CP2 140 aaKnown RBP12.77□□□□□ -0.37
GPC1-207ENST00000466624 SLC25A21Q9BQT8 299 aaPredicted RBP12.77□□□□□ -0.37
GPC1-207ENST00000466624 RANBP3Q9H6Z4 567 aaPredicted RBP12.77□□□□□ -0.37
GPC1-207ENST00000466624 SLC2A9Q9NRM0 540 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 C1RLQ9NZP8 487 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 GPR132Q9UNW8 380 aa12.77□□□□□ -0.37
GPC1-207ENST00000466624 TNFSF12O43508 249 aa12.76□□□□□ -0.37
GPC1-207ENST00000466624 IGKV1-16P04430 117 aa12.76□□□□□ -0.37
GPC1-207ENST00000466624 CRYBA1P05813 215 aa12.76□□□□□ -0.37
GPC1-207ENST00000466624 LGALS7P47929 136 aa12.76□□□□□ -0.37
GPC1-207ENST00000466624 ABCA11PQ4W5N1 156 aa12.76□□□□□ -0.37
GPC1-207ENST00000466624 NPBQ8NG41 125 aa12.76□□□□□ -0.37
GPC1-207ENST00000466624 OSR1Q8TAX0 266 aaPredicted RBP12.76□□□□□ -0.37
GPC1-207ENST00000466624 CD300LFQ8TDQ1 290 aa12.76□□□□□ -0.37
GPC1-207ENST00000466624 NPFFR1Q9GZQ6 430 aa12.76□□□□□ -0.37
GPC1-207ENST00000466624 PLSCR3Q9NRY6 295 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms