RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 LUMP51884 338 aaPredicted RBP10.15□□□□□ -0.78
COL5A1-206ENST00000465877 NDPQ00604 133 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 CFHR3Q02985 330 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 PLGLAQ15195 96 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 CLVS1Q8IUQ0 354 aaPredicted RBP10.15□□□□□ -0.78
COL5A1-206ENST00000465877 COMMD1Q8N668 190 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 OR4F17Q8NGA8 305 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 R3HDM4Q96D70 268 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 CMTM3Q96MX0 182 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 OR4F4Q96R69 305 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 TSNAXQ99598 290 aaKnown RBP10.15□□□□□ -0.78
COL5A1-206ENST00000465877 GON7Q9BXV9 100 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 PARP11Q9NR21 331 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 NECAP2Q9NVZ3 263 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 ANAPC10Q9UM13 185 aa10.15□□□□□ -0.78
COL5A1-206ENST00000465877 PRKDCP78527 4128 aaKnown RBP10.14□□□□□ -0.79
COL5A1-206ENST00000465877 IGHV7-81A0A0B4J1V7 117 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 J3QRK9 145 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 TUSC2O75896 110 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 IGF1P05019 195 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 OR5H8P0DN80 308 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 PF4V1P10720 104 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 ELK1P19419 428 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 VDAC1P21796 283 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 DUTP33316 252 aaKnown RBP10.14□□□□□ -0.79
COL5A1-206ENST00000465877 CBX3Q13185 183 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 SPCS2Q15005 226 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 RTL8BQ17RB0 113 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 KCTD9Q7L273 389 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 RAB2BQ8WUD1 216 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 DDB2Q92466 427 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 ADTRPQ96IZ2 230 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 HARBI1Q96MB7 349 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 RNF5Q99942 180 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 OR51J1Q9H342 316 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 TPSG1Q9NRR2 321 aa10.14□□□□□ -0.79
COL5A1-206ENST00000465877 METTL1Q9UBP6 276 aaKnown RBP10.14□□□□□ -0.79
COL5A1-206ENST00000465877 LINC00473A8K010 186 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 IGLV2-14P01704 120 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 ZNF182P17025 639 aaPredicted RBP10.13□□□□□ -0.79
COL5A1-206ENST00000465877 RPL23AP62750 156 aaKnown RBP10.13□□□□□ -0.79
COL5A1-206ENST00000465877 TAGLNQ01995 201 aaKnown RBP10.13□□□□□ -0.79
COL5A1-206ENST00000465877 PSG5Q15238 335 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 LIN54Q6MZP7 749 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 MZT2AQ6P582 158 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 TEX38Q6PEX7 206 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 BVESQ8NE79 360 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 OR5AP2Q8NGF4 316 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 FLYWCH2Q96CP2 140 aaKnown RBP10.13□□□□□ -0.79
COL5A1-206ENST00000465877 BCL7BQ9BQE9 202 aa10.13□□□□□ -0.79
COL5A1-206ENST00000465877 RBMX2Q9Y388 322 aaKnown RBP10.13□□□□□ -0.79
COL5A1-206ENST00000465877 SLC25A17O43808 307 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 NOL3O60936 208 aaKnown RBP10.12□□□□□ -0.79
COL5A1-206ENST00000465877 SLC22A5O76082 557 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 CRYZL1O95825 349 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 CA2P00918 260 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 PPYP01298 95 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 IGHG4P01861 327 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 PF4P02776 101 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 AADACP22760 399 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 FCGR2CP31995 323 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 PRSS3P35030 304 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 RPL5P46777 297 aaKnown RBP10.12□□□□□ -0.79
COL5A1-206ENST00000465877 RPS16P62249 146 aaKnown RBP10.12□□□□□ -0.79
COL5A1-206ENST00000465877 CDK10Q15131 360 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 ECSCRQ19T08 205 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 TMEM177Q53S58 311 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 LCNL1Q6ZST4 164 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 OVCH2Q7RTZ1 564 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 SNX29P2Q8IUI4 249 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 EHFQ9NZC4 300 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 MRPS7Q9Y2R9 242 aaKnown RBP10.12□□□□□ -0.79
COL5A1-206ENST00000465877 FBXO7Q9Y3I1 522 aa10.12□□□□□ -0.79
COL5A1-206ENST00000465877 TRAV41A0A0B4J266 112 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 SMIM31A0A1B0GVY4 71 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 FAM25AB3EWG3 89 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 FAM25CB3EWG5 89 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 FAM25GB3EWG6 89 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 G3V318 75 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 SHOXO15266 292 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 IGLV2-23P01705 113 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 RPLP1P05386 114 aaKnown RBP10.11□□□□□ -0.79
COL5A1-206ENST00000465877 RRASP10301 218 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 CRIP2P52943 208 aaPredicted RBP10.11□□□□□ -0.79
COL5A1-206ENST00000465877 TMBIM6P55061 237 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 TAS2R46P59540 309 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 FOXE3Q13461 319 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 OR2B11Q5JQS5 317 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 CXorf66Q5JRM2 361 aaPredicted RBP10.11□□□□□ -0.79
COL5A1-206ENST00000465877 C18orf65Q6ZTR6 163 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 RNF152Q8N8N0 203 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 KLHL30-AS1Q8NEE0 82 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 GPX8Q8TED1 209 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 ABHD5Q8WTS1 349 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 SECTM1Q8WVN6 248 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 SCPEP1Q9HB40 452 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 TAS2R8Q9NYW2 309 aa10.11□□□□□ -0.79
COL5A1-206ENST00000465877 CCDC59Q9P031 241 aaKnown RBP10.11□□□□□ -0.79
COL5A1-206ENST00000465877 EXTL2Q9UBQ6 330 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms