RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TPSG1Q9NRR2 321 aa16.96■□□□□ 0.31
LIME1-203ENST00000465591 SDHAF2Q9NX18 166 aa16.96■□□□□ 0.31
LIME1-203ENST00000465591 SMIM18P0DKX4 95 aa16.95■□□□□ 0.3
LIME1-203ENST00000465591 CRIP2P52943 208 aaPredicted RBP16.95■□□□□ 0.3
LIME1-203ENST00000465591 MXD1Q05195 221 aa16.95■□□□□ 0.3
LIME1-203ENST00000465591 PLGLAQ15195 96 aa16.95■□□□□ 0.3
LIME1-203ENST00000465591 ZNF660Q6AZW8 331 aaPredicted RBP16.95■□□□□ 0.3
LIME1-203ENST00000465591 Q6ZS49 121 aa16.95■□□□□ 0.3
LIME1-203ENST00000465591 ZNF491Q8N8L2 437 aa16.95■□□□□ 0.3
LIME1-203ENST00000465591 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.95■□□□□ 0.3
LIME1-203ENST00000465591 CASTOR1Q8WTX7 329 aa16.95■□□□□ 0.3
LIME1-203ENST00000465591 RNF5Q99942 180 aa16.95■□□□□ 0.3
LIME1-203ENST00000465591 METTL1Q9UBP6 276 aaKnown RBP16.95■□□□□ 0.3
LIME1-203ENST00000465591 TNCP24821 2201 aa16.94■□□□□ 0.3
LIME1-203ENST00000465591 DIRAS3O95661 229 aa16.94■□□□□ 0.3
LIME1-203ENST00000465591 FHL3Q13643 280 aa16.94■□□□□ 0.3
LIME1-203ENST00000465591 FAM103A1Q9BTL3 118 aaKnown RBP16.94■□□□□ 0.3
LIME1-203ENST00000465591 CENPOQ9BU64 300 aa16.94■□□□□ 0.3
LIME1-203ENST00000465591 NUBP2Q9Y5Y2 271 aa16.94■□□□□ 0.3
LIME1-203ENST00000465591 A3GALT2U3KPV4 340 aa16.94■□□□□ 0.3
LIME1-203ENST00000465591 LOC100506127A0A0U1RQW1 187 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 TALDO1P37837 337 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 RAB9AP51151 201 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 RPS16P62249 146 aaKnown RBP16.93■□□□□ 0.3
LIME1-203ENST00000465591 SRSF7Q16629 238 aaKnown RBP eCLIP16.93■□□□□ 0.3
LIME1-203ENST00000465591 ASPHD1Q5U4P2 390 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 HACD4Q5VWC8 232 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 PDPNQ86YL7 162 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 H1FOOQ8IZA3 346 aaPredicted RBP16.93■□□□□ 0.3
LIME1-203ENST00000465591 OR5H6Q8NGV6 325 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 NUDCD2Q8WVJ2 157 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 UBE2E2Q96LR5 201 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 OR5B12Q96R08 314 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 SLC35D1Q9NTN3 355 aa16.93■□□□□ 0.3
LIME1-203ENST00000465591 A0A1W2PN81 502 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 TMEM235A6NFC5 223 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 I3L521 148 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 CA2P00918 260 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 IGLV2-23P01705 113 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 APOA2P02652 100 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 DTYMKP23919 212 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 CHRNA7P36544 502 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 LUMP51884 338 aaPredicted RBP16.92■□□□□ 0.3
LIME1-203ENST00000465591 GNB1P62873 340 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 SSBP2P81877 361 aaPredicted RBP16.92■□□□□ 0.3
LIME1-203ENST00000465591 ZNF260Q3ZCT1 412 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 TMEM65Q6PI78 240 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 OR11H1Q8NG94 326 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 YIPF6Q96EC8 236 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 GINS4Q9BRT9 223 aa16.92■□□□□ 0.3
LIME1-203ENST00000465591 MCRIP2Q9BUT9 160 aaKnown RBP16.92■□□□□ 0.3
LIME1-203ENST00000465591 SLC25A17O43808 307 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 AIREO43918 545 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 SSX5O60225 188 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 ABHD5Q8WTS1 349 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 FLYWCH2Q96CP2 140 aaKnown RBP16.91■□□□□ 0.3
LIME1-203ENST00000465591 SLC25A38Q96DW6 304 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 TSNAXQ99598 290 aaKnown RBP16.91■□□□□ 0.3
LIME1-203ENST00000465591 ST6GALNAC5Q9BVH7 336 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 GPR61Q9BZJ8 451 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 ALX4Q9H161 411 aaPredicted RBP16.91■□□□□ 0.3
LIME1-203ENST00000465591 RHBDL2Q9NX52 303 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 FOXA2Q9Y261 457 aaPredicted RBP16.91■□□□□ 0.3
LIME1-203ENST00000465591 VSIG4Q9Y279 399 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 DNAH9Q9NYC9 4486 aa16.91■□□□□ 0.3
LIME1-203ENST00000465591 ARPC1BO15143 372 aaKnown RBP16.9■□□□□ 0.3
LIME1-203ENST00000465591 SPDEFO95238 335 aa16.9■□□□□ 0.3
LIME1-203ENST00000465591 TGFBR1P36897 503 aa16.9■□□□□ 0.3
LIME1-203ENST00000465591 PJVKQ0ZLH3 352 aa16.9■□□□□ 0.3
LIME1-203ENST00000465591 ARL6IP1Q15041 203 aa16.9■□□□□ 0.3
LIME1-203ENST00000465591 ZNF562Q6V9R5 426 aa16.9■□□□□ 0.3
LIME1-203ENST00000465591 PPP1R27Q86WC6 154 aa16.9■□□□□ 0.3
LIME1-203ENST00000465591 OR13F1Q8NGS4 319 aa16.9■□□□□ 0.3
LIME1-203ENST00000465591 SRRM4A7MD48 611 aaKnown RBP16.89■□□□□ 0.29
LIME1-203ENST00000465591 J3QRK9 145 aa16.89■□□□□ 0.29
LIME1-203ENST00000465591 CRYGBP07316 175 aa16.89■□□□□ 0.29
LIME1-203ENST00000465591 RUNX1Q01196 453 aa16.89■□□□□ 0.29
LIME1-203ENST00000465591 IDNKQ5T6J7 187 aa16.89■□□□□ 0.29
LIME1-203ENST00000465591 BVESQ8NE79 360 aa16.89■□□□□ 0.29
LIME1-203ENST00000465591 LFNGQ8NES3 379 aa16.89■□□□□ 0.29
LIME1-203ENST00000465591 OR5M8Q8NGP6 311 aa16.89■□□□□ 0.29
LIME1-203ENST00000465591 DPF1Q92782 380 aa16.89■□□□□ 0.29
LIME1-203ENST00000465591 RBM7Q9Y580 266 aaKnown RBP16.89■□□□□ 0.29
LIME1-203ENST00000465591 LINC00473A8K010 186 aa16.88■□□□□ 0.29
LIME1-203ENST00000465591 UNQ5815/PRO19632Q6UWF5 114 aa16.88■□□□□ 0.29
LIME1-203ENST00000465591 GPR141Q7Z602 305 aa16.88■□□□□ 0.29
LIME1-203ENST00000465591 OR1N2Q8NGR9 330 aa16.88■□□□□ 0.29
LIME1-203ENST00000465591 DDB2Q92466 427 aa16.88■□□□□ 0.29
LIME1-203ENST00000465591 FUNDC2Q9BWH2 189 aa16.88■□□□□ 0.29
LIME1-203ENST00000465591 SCOCQ9UIL1 159 aa16.88■□□□□ 0.29
LIME1-203ENST00000465591 NFYAP23511 347 aaPredicted RBP16.87■□□□□ 0.29
LIME1-203ENST00000465591 DUTP33316 252 aaKnown RBP16.87■□□□□ 0.29
LIME1-203ENST00000465591 ALDH3B2P48448 385 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 FXYD3Q14802 87 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 MRGPRG-AS1Q2M3A8 158 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 AKIRIN2Q53H80 203 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 TMEM177Q53S58 311 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 ACTBL2Q562R1 376 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 TCTEX1D1Q8N7M0 179 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 GRPEL2Q8TAA5 225 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms