RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CX3CL1P78423 397 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 MXD1Q05195 221 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 FHL3Q13643 280 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 PSG5Q15238 335 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 SRSF7Q16629 238 aaKnown RBP eCLIP7.93□□□□□ -1.14
SF3A3-204ENST00000462258 C19orf54Q5BKX5 351 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF660Q6AZW8 331 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-204ENST00000462258 TMEM65Q6PI78 240 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 Q6ZS49 121 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 TCTEX1D1Q8N7M0 179 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 MINDY2Q8NBR6 621 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 OR5M8Q8NGP6 311 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 NUDCD2Q8WVJ2 157 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 C5orf30Q96GV9 206 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 UBE2E2Q96LR5 201 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 TSNAXQ99598 290 aaKnown RBP7.93□□□□□ -1.14
SF3A3-204ENST00000462258 KLK15Q9H2R5 256 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 RNF167Q9H6Y7 350 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 GNB4Q9HAV0 340 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 TPSG1Q9NRR2 321 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 SDHAF2Q9NX18 166 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 FOXA2Q9Y261 457 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-204ENST00000462258 RBM7Q9Y580 266 aaKnown RBP7.93□□□□□ -1.14
SF3A3-204ENST00000462258 IGKV1D-8A0A087WSZ0 117 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 TMEM235A6NFC5 223 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 K7EIL1 84 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 FCN1O00602 326 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 SLC25A17O43808 307 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 SOX15O60248 233 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 CLEC2LP0C7M8 214 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 CD36P16671 472 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 LUMP51884 338 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-204ENST00000462258 GNG2P59768 71 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 RPS16P62249 146 aaKnown RBP7.92□□□□□ -1.14
SF3A3-204ENST00000462258 CBX3Q13185 183 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 HACD4Q5VWC8 232 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 H1FOOQ8IZA3 346 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF491Q8N8L2 437 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 OR11H1Q8NG94 326 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 ARPC1AQ92747 370 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 FLYWCH2Q96CP2 140 aaKnown RBP7.92□□□□□ -1.14
SF3A3-204ENST00000462258 HARBI1Q96MB7 349 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 CLCC1Q96S66 551 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 FAM103A1Q9BTL3 118 aaKnown RBP7.92□□□□□ -1.14
SF3A3-204ENST00000462258 CENPOQ9BU64 300 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 RHBDL2Q9NX52 303 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 GAB2Q9UQC2 676 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 VSIG4Q9Y279 399 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 ETV7Q9Y603 341 aa7.92□□□□□ -1.14
SF3A3-204ENST00000462258 WI2-2373I1.2A0A1W2PRP0 233 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 I3L521 148 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 OR8U8P0C7N1 319 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 RAB9AP51151 201 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 SCAND1P57086 179 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 GNB1P62873 340 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 RUNX1Q01196 453 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 TMEM267Q0VDI3 215 aaPredicted RBP7.91□□□□□ -1.14
SF3A3-204ENST00000462258 KIAA0141Q14154 515 aaPredicted RBP7.91□□□□□ -1.14
SF3A3-204ENST00000462258 RTL8BQ17RB0 113 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF260Q3ZCT1 412 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 CDNFQ49AH0 187 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 ACTBL2Q562R1 376 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 PYHIN1Q6K0P9 492 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 PPP1R27Q86WC6 154 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 GRPEL2Q8TAA5 225 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 CASTOR1Q8WTX7 329 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 SLC25A38Q96DW6 304 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 OR5B12Q96R08 314 aa7.91□□□□□ -1.14
SF3A3-204ENST00000462258 SEC14L6B5MCN3 397 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 IGLV2-23P01705 113 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 EGR2P11161 476 aaPredicted RBP7.9□□□□□ -1.14
SF3A3-204ENST00000462258 PITPNAQ00169 270 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 TAGLNQ01995 201 aaKnown RBP7.9□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF616Q08AN1 781 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 TIMM50Q3ZCQ8 353 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 AKIRIN2Q53H80 203 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 IDNKQ5T6J7 187 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 C9orf66Q5T8R8 295 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 ASPHD1Q5U4P2 390 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 UNQ5815/PRO19632Q6UWF5 114 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF562Q6V9R5 426 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF645Q8N7E2 425 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 BVESQ8NE79 360 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 LFNGQ8NES3 379 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 OR5H6Q8NGV6 325 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 ADTRPQ96IZ2 230 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 ST6GALNAC5Q9BVH7 336 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 DCSTAMPQ9H295 470 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 VCX3AQ9NNX9 186 aa7.9□□□□□ -1.14
SF3A3-204ENST00000462258 ARPC1BO15143 372 aaKnown RBP7.89□□□□□ -1.15
SF3A3-204ENST00000462258 SHOXO15266 292 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 SSX5O60225 188 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 TNFAIP8O95379 198 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 LGALS1P09382 135 aaKnown RBP7.89□□□□□ -1.15
SF3A3-204ENST00000462258 CTXN2P0C2S0 81 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 RRASP10301 218 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 NFYAP23511 347 aaPredicted RBP7.89□□□□□ -1.15
SF3A3-204ENST00000462258 DUTP33316 252 aaKnown RBP7.89□□□□□ -1.15
SF3A3-204ENST00000462258 LGALS7P47929 136 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 TPPP2P59282 170 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms