RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 WNT5BQ9H1J7 359 aa13.9□□□□□ -0.19
LSS-205ENST00000457828 NTF3P20783 257 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 FAM3BP58499 235 aaPredicted RBP13.89□□□□□ -0.19
LSS-205ENST00000457828 HIST1H3AP68431 136 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 KCNMB1Q16558 191 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 BRCA2P51587 3418 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 PMELP40967 661 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 GPR12P47775 334 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 CLDN18P56856 261 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 PYY3Q5JQD4 70 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 C18orf12Q96KH6 178 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 MTCH1Q9NZJ7 389 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 IGKV1-12A0A0C4DH73 117 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 IGKV1D-12P01611 117 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 LYL1P12980 280 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 KRTDAPP60985 99 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 ELOBQ15370 118 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 Q3ZCU0 254 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 TMEM204Q9BSN7 226 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 TMEM147Q9BVK8 224 aa13.89□□□□□ -0.19
LSS-205ENST00000457828 PNRC2Q9NPJ4 139 aaKnown RBP13.89□□□□□ -0.19
LSS-205ENST00000457828 ICAM4Q14773 271 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 MRGPRDQ8TDS7 321 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 PSG11Q9UQ72 335 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 TRGV10A0A0A0MS01 117 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 IGKV1D-13A0A0B4J2D9 117 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 DUXBA0A1W2PPF3 345 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 K7ENP7 123 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 IGKV1-13P0DP09 117 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 SSX8Q7RTT4 187 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 OR1A1Q9P1Q5 309 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 HEATR1Q9H583 2144 aaKnown RBP13.88□□□□□ -0.19
LSS-205ENST00000457828 C10orf91Q5T1B1 145 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 TMEM54Q969K7 222 aa13.88□□□□□ -0.19
LSS-205ENST00000457828 RCC1LQ96I51 464 aaKnown RBP13.88□□□□□ -0.19
LSS-205ENST00000457828 LOC102723971A0A1B0GUV8 181 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 ERVFRD-1P60508 538 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 OBSL1O75147 1896 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 TMPRSS2O15393 492 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 GYPAP02724 150 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 SERF2P84101 59 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 OR5D13Q8NGL4 314 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 CLDND2Q8NHS1 167 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 RNF122Q9H9V4 155 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 DTX1Q86Y01 620 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 KDF1Q8NAX2 398 aaPredicted RBP13.87□□□□□ -0.19
LSS-205ENST00000457828 DTD1Q8TEA8 209 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 ZNF355PQ9NSJ1 428 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 IGKV1-27A0A075B6S5 117 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 SYNGR3O43761 229 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 EGR1P18146 543 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 OR1P1Q8NH06 330 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 SPRR3Q9UBC9 169 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 RPH3ALQ9UNE2 315 aa13.87□□□□□ -0.19
LSS-205ENST00000457828 CEACAM18A8MTB9 384 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 PROB1E7EW31 1015 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 FCGR3BO75015 233 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 OR5A2Q8NGI9 324 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 TAF15Q92804 592 aaKnown RBP eCLIP13.86□□□□□ -0.19
LSS-205ENST00000457828 GP6Q9HCN6 339 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 FKBP11Q9NYL4 201 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 MRPS18CQ9Y3D5 142 aaKnown RBP13.86□□□□□ -0.19
LSS-205ENST00000457828 RNF115Q9Y4L5 304 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 TLN1Q9Y490 2541 aaKnown RBP13.86□□□□□ -0.19
LSS-205ENST00000457828 TMEM30CPA0ZSE6 113 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 ONECUT1Q9UBC0 465 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 hCG_38984A0A1B0GV85 526 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 CEACAM21Q3KPI0 293 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 MOB1BQ7L9L4 216 aa13.86□□□□□ -0.19
LSS-205ENST00000457828 CTXND1A0A1B0GTU2 59 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 OR7C2O60412 319 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 KHDC1LQ5JSQ8 128 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 SIGLECL1Q8N7X8 197 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 KLF2Q9Y5W3 355 aaPredicted RBP13.85□□□□□ -0.19
LSS-205ENST00000457828 ERVFC1-1P60608 527 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 FOXD3Q9UJU5 478 aaPredicted RBP13.85□□□□□ -0.19
LSS-205ENST00000457828 IGLV3-32A0A0A0MS00 114 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 TRAV38-1A0A0B4J264 116 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 OR4A8P0C604 315 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 UCP1P25874 307 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 SLC25A53Q5H9E4 307 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 TPRX1Q8N7U7 411 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 OR4D5Q8NGN0 318 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 S1PR3Q99500 378 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 LPAR2Q9HBW0 351 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 Q6ZS92 163 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 LIME1Q9H400 295 aa13.85□□□□□ -0.19
LSS-205ENST00000457828 A0A0C4DFX4 3053 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 M0R1X1 148 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 C22orf15Q8WYQ4 148 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 ABHD14BQ96IU4 210 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 RNF7Q9UBF6 113 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 KIAA1324LA8MWY0 1029 aaPredicted RBP13.84□□□□□ -0.19
LSS-205ENST00000457828 APOA2P02652 100 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 SOD3P08294 240 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 HIST1H1BP16401 226 aaKnown RBP13.84□□□□□ -0.19
LSS-205ENST00000457828 PMCHP20382 165 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 FGFRL1Q8N441 504 aa13.84□□□□□ -0.19
LSS-205ENST00000457828 M0R143 59 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms