RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 NDPQ00604 133 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 GABPB1Q06547 395 aaPredicted RBP3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF616Q08AN1 781 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 MED21Q13503 144 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 ECSCRQ19T08 205 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 C5orf64Q2M2E5 130 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF833PQ6ZTB9 187 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 CEACAM19Q7Z692 300 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 LRRTM1Q86UE6 522 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 HAPLN4Q86UW8 402 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SBSPONQ8IVN8 264 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 CDH26Q8IXH8 852 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 NPBQ8NG41 125 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 OR8H1Q8NGG4 311 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 TMEM203Q969S6 136 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 UBE2E2Q96LR5 201 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 NEDD4LQ96PU5 975 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 YPEL2Q96QA6 119 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 TMED9Q9BVK6 235 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 IFI27L2Q9H2X8 130 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 PLEKHJ1Q9NW61 149 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 MGAT4CQ9UBM8 478 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 GAB2Q9UQC2 676 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 VSIG4Q9Y279 399 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF256Q9Y2P7 627 aaPredicted RBP3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 NUBP2Q9Y5Y2 271 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM90A7PA6NKC0 464 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM90A23PA8MXZ1 464 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 H7C2Y5 167 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 RRHO14718 337 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 OVOL1O14753 267 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 MYL12BO14950 172 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 TXNL1O43396 289 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 SAP30O75446 220 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 CA11O75493 328 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 RGS11O94810 467 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 HLA-DRB1P01911 266 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 GLAP06280 429 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 CD3GP09693 182 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 NPSP0C0P6 89 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 OR8U8P0C7N1 319 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 OR5H8P0DN80 308 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 TMEM50BP56557 158 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 CLDN12P56749 244 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 TAS2R43P59537 309 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 RPS27AP62979 156 aaKnown RBP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 QRFPP83859 136 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 PLA2G7Q13093 441 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 UNC119Q13432 240 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 PLGLAQ15195 96 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 RCN1Q15293 331 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 P2RY14Q15391 338 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 HMGN3Q15651 99 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 SRSF7Q16629 238 aaKnown RBP eCLIP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 RNASE12Q5GAN4 147 aaKnown RBP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 PLAC9Q5JTB6 97 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 RBM48Q5RL73 367 aaKnown RBP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 C1orf100Q5SVJ3 147 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 C6orf141Q5SZD1 244 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM90A2PQ658T7 463 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 GLT8D1Q68CQ7 371 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 TRAT1Q6PIZ9 186 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 UNQ5815/PRO19632Q6UWF5 114 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM131AQ6UXB0 335 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 PPP1R27Q86WC6 154 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 C8orf59Q8N0T1 100 aaPredicted RBP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 Q8N1X5 172 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 MINDY2Q8NBR6 621 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 SETD9Q8NE22 299 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 LFNGQ8NES3 379 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 OR5T1Q8NG75 326 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 OR2AK2Q8NG84 335 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 MYOZ3Q8TDC0 251 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 NPIPB3Q92617 1050 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 GFI1Q99684 422 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 UQCC2Q9BRT2 126 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 AGMATQ9BSE5 352 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 TOLLIPQ9H0E2 274 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 CST11Q9H112 138 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 CHMP1AQ9HD42 196 aaPredicted RBP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 RAB9BQ9NP90 201 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 PLCXD1Q9NUJ7 323 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 FKBP14Q9NWM8 211 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 CNOT2Q9NZN8 540 aaKnown RBP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 ABRACLQ9P1F3 81 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 OR1A1Q9P1Q5 309 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 KIAA1456Q9P272 454 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 ZMAT5Q9UDW3 170 aaKnown RBP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 AK3Q9UIJ7 227 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 JPT1Q9UK76 154 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 ERGIC3Q9Y282 383 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 AK6Q9Y3D8 172 aaKnown RBP3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 SMAD5-AS1Q9Y6J3 95 aa3.61□□□□□ -1.83
GTF3C3-208ENST00000455546 COL7A1Q02388 2944 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 IGKV1-6A0A0C4DH72 117 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 TRIM64CA6NLI5 447 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 TMEM14DPA8MWL7 114 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 LINC01619G3V211 115 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 H0YJW9 148 aa3.6□□□□□ -1.83
GTF3C3-208ENST00000455546 RAB29O14966 203 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms