RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 PDPNQ86YL7 162 aa11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 SLC38A6Q8IZM9 456 aa11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 OR4C16Q8NGL9 310 aa11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 SECTM1Q8WVN6 248 aa11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 ZNF486Q96H40 463 aaPredicted RBP11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 RBM14Q96PK6 669 aaKnown RBP11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 SDHCQ99643 169 aaPredicted RBP11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 SCP2D1Q9UJQ7 156 aa11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 WASHC3Q9Y3C0 194 aa11.47□□□□□ -0.57
HMGXB4-204ENST00000455359 NAP1L6A6NFF2 107 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 H0YJW9 148 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 J3QRK9 145 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 GPR31O00270 319 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 IGKV1D-33P01593 117 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 IGKV1-33P01594 117 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 DUTP33316 252 aaKnown RBP11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 EIF4EBP1Q13541 118 aaPredicted RBP11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 BAK1Q16611 211 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 AADACL3Q5VUY0 350 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 Q8N6K4 173 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 ZNF383Q8NA42 475 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 OR4D10Q8NGI6 311 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 SCGB3A2Q96PL1 93 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 C7orf50Q9BRJ6 194 aaKnown RBP11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 CCL28Q9NRJ3 127 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 C1RLQ9NZP8 487 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.57
HMGXB4-204ENST00000455359 CENPXA8MT69 81 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 FGF16O43320 207 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 CRYBA1P05813 215 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 IL7P13232 177 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 TMEM11P17152 192 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 CATR1Q13166 79 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 CBX3Q13185 183 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 HES1Q14469 280 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 LY6EQ16553 131 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 ZNF57Q68EA5 555 aaPredicted RBP11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 CCBE1Q6UXH8 406 aaPredicted RBP11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 TCTEX1D1Q8N7M0 179 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 ZFAND1Q8TCF1 268 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 DDB2Q92466 427 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 C5orf30Q96GV9 206 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 EAF1Q96JC9 268 aaPredicted RBP11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 DUX5Q96PT3 197 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 RSRP1Q9BUV0 290 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 RANBP3Q9H6Z4 567 aaPredicted RBP11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 HRASLSQ9HDD0 168 aa11.45□□□□□ -0.58
HMGXB4-204ENST00000455359 IGHV3-72A0A0B4J1Y9 119 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 RNF212BA8MTL3 300 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 LGALS7P47929 136 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 SCGB2B2Q4G0G5 96 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 DHRS7BQ6IAN0 325 aaPredicted RBP11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 ZNF818PQ6ZRF7 136 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 DRAXINQ8NBI3 349 aaPredicted RBP11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 OR51S1Q8NGJ8 323 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 OR4C13Q8NGP0 309 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 CD300LFQ8TDQ1 290 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 FXYD6Q9H0Q3 95 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 TNFRSF19Q9NS68 423 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 SLC35D1Q9NTN3 355 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 MCUBQ9NWR8 336 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 MOB4Q9Y3A3 225 aa11.44□□□□□ -0.58
HMGXB4-204ENST00000455359 FAM181BA6NEQ2 426 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 H7C2Y5 167 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 NDUFA7O95182 113 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 CD24P25063 80 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 RND3P61587 244 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 IDO2Q6ZQW0 420 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 KCTD9Q7L273 389 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 TMEM158Q8WZ71 300 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 FLYWCH2Q96CP2 140 aaKnown RBP11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 SLC25A21Q9BQT8 299 aaPredicted RBP11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 SLC25A33Q9BSK2 321 aa11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 FAM212BQ9NTI7 297 aaPredicted RBP11.43□□□□□ -0.58
HMGXB4-204ENST00000455359 LINC00473A8K010 186 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 CHST1O43916 411 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 PGLYRP1O75594 196 aaPredicted RBP11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 SPDEFO95238 335 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 CTSDP07339 412 aaPredicted RBP11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 PGAM2P15259 253 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 KRTAP21-3Q3LHN1 58 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 TMEM177Q53S58 311 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 FAAP20Q6NZ36 180 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 GLDNQ6ZMI3 551 aaPredicted RBP11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 TMEM219Q86XT9 240 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 POC5Q8NA72 575 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 NPBQ8NG41 125 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 OR4S2Q8NH73 311 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 OSR1Q8TAX0 266 aaPredicted RBP11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 TCTEX1D2Q8WW35 142 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 TSNAXQ99598 290 aaKnown RBP11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 PLSCR3Q9NRY6 295 aa11.42□□□□□ -0.58
HMGXB4-204ENST00000455359 COL6A5A8TX70 2615 aa11.41□□□□□ -0.58
HMGXB4-204ENST00000455359 A0A1B0GUS0 222 aa11.41□□□□□ -0.58
HMGXB4-204ENST00000455359 B3GALNT1O75752 331 aa11.41□□□□□ -0.58
HMGXB4-204ENST00000455359 TSPAN9O75954 239 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms