RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ZNF92Q03936 586 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 CDNFQ49AH0 187 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 FAM74A3Q4VXF1 159 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 RNASE10Q5GAN6 216 aaKnown RBP3.47□□□□□ -1.85
SDCBP-205ENST00000447267 DNLZQ5SXM8 178 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 UTF1Q5T230 341 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 LAMTOR1Q6IAA8 161 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 SHFQ7M4L6 423 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 SLC16A9Q7RTY1 509 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 MRPL21Q7Z2W9 205 aaKnown RBP3.47□□□□□ -1.85
SDCBP-205ENST00000447267 C10orf107Q8IVU9 208 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 ABHD12Q8N2K0 398 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 LINC00471Q8N535 108 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 FAM89BQ8N5H3 189 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 CD177Q8N6Q3 437 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 Q8N9W7 124 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 NEXN-AS1Q8NBZ9 246 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 OR2D3Q8NGH3 330 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 OR8J1Q8NGP2 316 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 OR13F1Q8NGS4 319 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 OR4A5Q8NH83 315 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 NFKBIDQ8NI38 313 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 GLYATL2Q8WU03 294 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 AP3S1Q92572 193 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 RPL3LQ92901 407 aaKnown RBP3.47□□□□□ -1.85
SDCBP-205ENST00000447267 SORT1Q99523 831 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 KCTD14Q9BQ13 255 aaPredicted RBP3.47□□□□□ -1.85
SDCBP-205ENST00000447267 TMEM208Q9BTX3 173 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 ALG12Q9BV10 488 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 ROPN1BQ9BZX4 212 aaPredicted RBP3.47□□□□□ -1.85
SDCBP-205ENST00000447267 FGF23Q9GZV9 251 aaPredicted RBP3.47□□□□□ -1.85
SDCBP-205ENST00000447267 ROPN1Q9HAT0 212 aaPredicted RBP3.47□□□□□ -1.85
SDCBP-205ENST00000447267 RANGRFQ9HD47 186 aaPredicted RBP3.47□□□□□ -1.85
SDCBP-205ENST00000447267 ABCB9Q9NP78 766 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 MED9Q9NWA0 146 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 RDH8Q9NYR8 311 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 KIF25Q9UIL4 384 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 ANGPT4Q9Y264 503 aa3.47□□□□□ -1.85
SDCBP-205ENST00000447267 C5orf52A6NGY3 159 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 A6NIZ1 184 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 AQP12BA6NM10 295 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 BHLHE40O14503 412 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 MRPS14O60783 128 aaKnown RBP3.46□□□□□ -1.86
SDCBP-205ENST00000447267 SERPINA1P01009 418 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 SERPINA3P01011 423 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 IFNA7P01567 189 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 IGLV1-47P01700 117 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 MT-ND2P03891 347 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 BCHEP06276 602 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 TSPAN19P0C672 248 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 LINC00032P0C843 101 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 SPP1P10451 314 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 LBPP18428 481 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 RAB3BP20337 219 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 S100A11P31949 105 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 AQP2P41181 271 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 MNDAP41218 407 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 FGF8P55075 233 aaPredicted RBP3.46□□□□□ -1.86
SDCBP-205ENST00000447267 RAB2AP61019 212 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 RAB5BP61020 215 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 PKIAP61925 76 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 HIST1H3AP68431 136 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 BDH1Q02338 343 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 MEF2CQ06413 473 aaPredicted RBP3.46□□□□□ -1.86
SDCBP-205ENST00000447267 MZT1Q08AG7 82 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 DIAPH2-AS1Q14236 149 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 RBM39Q14498 530 aaKnown RBP3.46□□□□□ -1.86
SDCBP-205ENST00000447267 ARL6IP1Q15041 203 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 OR1Q1Q15612 314 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 USF2Q15853 346 aaPredicted RBP3.46□□□□□ -1.86
SDCBP-205ENST00000447267 DEFB114Q30KQ6 69 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 SNAI3Q3KNW1 292 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 UGT3A2Q3SY77 523 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 HIST2H3PS2Q5TEC6 136 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 TEX261Q6UWH6 196 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 HIST2H3AQ71DI3 136 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 LAX1Q8IWV1 398 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 OR2C3Q8N628 320 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 STXBP6Q8NFX7 210 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 OR8S1Q8NH09 359 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 OR2AE1Q8NHA4 323 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 RHOXF1Q8NHV9 184 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 RNASE8Q8TDE3 154 aaKnown RBP3.46□□□□□ -1.86
SDCBP-205ENST00000447267 SLC38A5Q8WUX1 472 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 MITD1Q8WV92 249 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 TCTEX1D2Q8WW35 142 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 MRGPRFQ96AM1 343 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM19Q96HH6 336 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 MS4A10Q96PG2 267 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 RNF2Q99496 336 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 PRRT1Q99946 306 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 CMSS1Q9BQ75 279 aaKnown RBP3.46□□□□□ -1.86
SDCBP-205ENST00000447267 THTPAQ9BU02 230 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM133Q9H2Q1 129 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 ADGRL4Q9HBW9 690 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 UBQLN2Q9UHD9 624 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 SCP2D1Q9UJQ7 156 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 A4GNTQ9UNA3 340 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 HSPB11Q9Y547 144 aa3.46□□□□□ -1.86
SDCBP-205ENST00000447267 U3KQ87 197 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms