RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 OR5B12Q96R08 314 aa15.66■□□□□ 0.1
LRCH3-208ENST00000443727 OR51E2Q9H255 320 aa15.66■□□□□ 0.1
LRCH3-208ENST00000443727 SLC35D1Q9NTN3 355 aa15.66■□□□□ 0.1
LRCH3-208ENST00000443727 FOXA2Q9Y261 457 aaPredicted RBP15.66■□□□□ 0.1
LRCH3-208ENST00000443727 LOC100506127A0A0U1RQW1 187 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 WI2-2373I1.2A0A1W2PRP0 233 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 NEDD8Q15843 81 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 PPP1R27Q86WC6 154 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 TCTEX1D1Q8N7M0 179 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 ZNF491Q8N8L2 437 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 MINDY2Q8NBR6 621 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 MYOZ3Q8TDC0 251 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 TOLLIPQ9H0E2 274 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 FBXO7Q9Y3I1 522 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 DNAH3Q8TD57 4116 aa15.65■□□□□ 0.1
LRCH3-208ENST00000443727 SCGNO76038 276 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 SPDEFO95238 335 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 CA2P00918 260 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 SNRPBP14678 240 aaKnown RBP15.64■□□□□ 0.09
LRCH3-208ENST00000443727 DTYMKP23919 212 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 SDC2P34741 201 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 MXD1Q05195 221 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 SFXN4Q6P4A7 337 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 OR1N2Q8NGR9 330 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 ST6GALNAC5Q9BVH7 336 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 GNB4Q9HAV0 340 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 SDHAF2Q9NX18 166 aa15.64■□□□□ 0.09
LRCH3-208ENST00000443727 SLC25A17O43808 307 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 CD40LGP29965 261 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 LUMP51884 338 aaPredicted RBP15.63■□□□□ 0.09
LRCH3-208ENST00000443727 DGCR2P98153 550 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 SRSF7Q16629 238 aaKnown RBP eCLIP15.63■□□□□ 0.09
LRCH3-208ENST00000443727 RTL8BQ17RB0 113 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 ACTBL2Q562R1 376 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 HACD4Q5VWC8 232 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 UNQ5815/PRO19632Q6UWF5 114 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 ZNF562Q6V9R5 426 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 Q6ZS49 121 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 LGALS14Q8TCE9 139 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 FAM103A1Q9BTL3 118 aaKnown RBP15.63■□□□□ 0.09
LRCH3-208ENST00000443727 ELF5Q9UKW6 265 aaPredicted RBP15.63■□□□□ 0.09
LRCH3-208ENST00000443727 GAB2Q9UQC2 676 aa15.63■□□□□ 0.09
LRCH3-208ENST00000443727 SEC14L6B5MCN3 397 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 CNIH1O95406 144 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 OR8U8P0C7N1 319 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 CD36P16671 472 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 CRIP2P52943 208 aaPredicted RBP15.62■□□□□ 0.09
LRCH3-208ENST00000443727 GNG2P59768 71 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 GNB1P62873 340 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 TAGLNQ01995 201 aaKnown RBP15.62■□□□□ 0.09
LRCH3-208ENST00000443727 ZNF616Q08AN1 781 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 FHL3Q13643 280 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 KIAA0141Q14154 515 aaPredicted RBP15.62■□□□□ 0.09
LRCH3-208ENST00000443727 C9orf66Q5T8R8 295 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 GRPEL2Q8TAA5 225 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 CASTOR1Q8WTX7 329 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 ARPC1AQ92747 370 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.62■□□□□ 0.09
LRCH3-208ENST00000443727 NUBP2Q9Y5Y2 271 aa15.62■□□□□ 0.09
LRCH3-208ENST00000443727 IGKV1D-8A0A087WSZ0 117 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 I3L521 148 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 EGR2P11161 476 aaPredicted RBP15.61■□□□□ 0.09
LRCH3-208ENST00000443727 LGALS7P47929 136 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 PITPNAQ00169 270 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 RUNX1Q01196 453 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 FXYD3Q14802 87 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 KCTD21Q4G0X4 260 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 AKIRIN2Q53H80 203 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 C19orf54Q5BKX5 351 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 PYHIN1Q6K0P9 492 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 H1FOOQ8IZA3 346 aaPredicted RBP15.61■□□□□ 0.09
LRCH3-208ENST00000443727 LFNGQ8NES3 379 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 NUDCD2Q8WVJ2 157 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 HARBI1Q96MB7 349 aa15.61■□□□□ 0.09
LRCH3-208ENST00000443727 TMEM235A6NFC5 223 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 J3QRK9 145 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 SHOXO15266 292 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 SOX15O60248 233 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 CTXN2P0C2S0 81 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 CLEC2LP0C7M8 214 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 RRASP10301 218 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 IDNKQ5T6J7 187 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 BVESQ8NE79 360 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 ADTRPQ96IZ2 230 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 MS4A10Q96PG2 267 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 DCSTAMPQ9H295 470 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 RNF167Q9H6Y7 350 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 TPSG1Q9NRR2 321 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 RHBDL2Q9NX52 303 aa15.6■□□□□ 0.09
LRCH3-208ENST00000443727 RAMP3O60896 148 aa15.59■□□□□ 0.09
LRCH3-208ENST00000443727 DCTN2Q13561 401 aaKnown RBP15.59■□□□□ 0.09
LRCH3-208ENST00000443727 ZNF260Q3ZCT1 412 aa15.59■□□□□ 0.09
LRCH3-208ENST00000443727 ALX4Q9H161 411 aaPredicted RBP15.59■□□□□ 0.09
LRCH3-208ENST00000443727 ZNF355PQ9NSJ1 428 aa15.59■□□□□ 0.09
LRCH3-208ENST00000443727 TPPP2P59282 170 aa15.58■□□□□ 0.08
LRCH3-208ENST00000443727 C5orf30Q96GV9 206 aa15.58■□□□□ 0.08
LRCH3-208ENST00000443727 ETV7Q9Y603 341 aa15.58■□□□□ 0.08
LRCH3-208ENST00000443727 IGLV2-23P01705 113 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 LGALS1P09382 135 aaKnown RBP15.57■□□□□ 0.08
LRCH3-208ENST00000443727 NFYAP23511 347 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms