RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 PPBPP02775 128 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 ACSF3Q4G176 576 aaPredicted RBP14.22□□□□□ -0.13
PMS1-213ENST00000441310 BET1LQ9NYM9 111 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 TBL2Q9Y4P3 447 aaKnown RBP14.22□□□□□ -0.13
PMS1-213ENST00000441310 DOCK7Q96N67 2140 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 IGHV2-70DA0A0C4DH43 119 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 F6UZH7 168 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 MLNRO43193 412 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 RBFOX2O43251 390 aaKnown RBP eCLIP14.22□□□□□ -0.13
PMS1-213ENST00000441310 NDUFB4O95168 129 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 SERPINE2P07093 398 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 OR2Y1Q8NGV0 311 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 WDR54Q9H977 334 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 DOCK10Q96BY6 2186 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 A0A0G2JMM0 328 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 A0A0U1RQV5 110 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 CTXND1A0A1B0GTU2 59 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 MDFIC2A0A1B0GVS7 189 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 A0A1W2PPB8 328 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 A0A1W2PRS3 328 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 KIR3DP1A8MWS1 328 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 KIAA1324LA8MWY0 1029 aaPredicted RBP14.22□□□□□ -0.13
PMS1-213ENST00000441310 M0R135 149 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 CBR3O75828 277 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 DKK1O94907 266 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 PSG2P11465 335 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 FOLR3P41439 243 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 FOXL1Q12952 345 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 OR5D13Q8NGL4 314 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 ZNF799Q96GE5 643 aa14.22□□□□□ -0.13
PMS1-213ENST00000441310 PCNX2A6NKB5 2137 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 TRAF3IP2O43734 574 aaPredicted RBP14.21□□□□□ -0.13
PMS1-213ENST00000441310 NRASP01111 189 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 KRASP01116 189 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 FRMD6-AS1P0C7T7 363 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 KITLGP21583 273 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 GUCA1AP43080 201 aaPredicted RBP14.21□□□□□ -0.13
PMS1-213ENST00000441310 AMTP48728 403 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 YPEL3P61236 119 aaPredicted RBP14.21□□□□□ -0.13
PMS1-213ENST00000441310 RPS16P62249 146 aaKnown RBP14.21□□□□□ -0.13
PMS1-213ENST00000441310 ZNF90Q03938 601 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 SLC38A11Q08AI6 406 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 RPH3ALQ9UNE2 315 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 RBM7Q9Y580 266 aaKnown RBP14.21□□□□□ -0.13
PMS1-213ENST00000441310 ZNF407Q9C0G0 2248 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 TNRC6BQ9UPQ9 1833 aaKnown RBP14.21□□□□□ -0.13
PMS1-213ENST00000441310 MED13Q9UHV7 2174 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 CD300LBA8K4G0 201 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 SSR4P51571 173 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 SLC23A3Q6PIS1 610 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 RNF138Q8WVD3 245 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 SFRP2Q96HF1 295 aa14.21□□□□□ -0.13
PMS1-213ENST00000441310 RIF1Q5UIP0 2472 aaKnown RBP14.21□□□□□ -0.14
PMS1-213ENST00000441310 FCN1O00602 326 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 PGLYRP1O75594 196 aaPredicted RBP14.2□□□□□ -0.14
PMS1-213ENST00000441310 GNB1P62873 340 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 RPL19P84098 196 aaKnown RBP14.2□□□□□ -0.14
PMS1-213ENST00000441310 RSPO1Q2MKA7 263 aaPredicted RBP14.2□□□□□ -0.14
PMS1-213ENST00000441310 TMPRSS7Q7RTY8 843 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 YRDCQ86U90 279 aaKnown RBP14.2□□□□□ -0.14
PMS1-213ENST00000441310 NRN1Q9NPD7 142 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 PLEK2Q9NYT0 353 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 LOC102723996A0A087X1L8 192 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 ATP5G3P48201 142 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 TMEM211Q6ICI0 200 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 ERRFI1Q9UJM3 462 aaPredicted RBP14.2□□□□□ -0.14
PMS1-213ENST00000441310 GPX1P07203 203 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 TNFSF4P23510 183 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 TSPOP30536 169 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 IER3P46695 156 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 PSG4Q00888 419 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 SPSB1Q96BD6 273 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 PROK2Q9HC23 129 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 LOXL2Q9Y4K0 774 aa14.2□□□□□ -0.14
PMS1-213ENST00000441310 H0Y980 276 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 ESDP10768 282 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 SGCZQ96LD1 299 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 LRFN3Q9BTN0 628 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 LOC102725191A0A1B0GVB3 256 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 GJC3Q8NFK1 279 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 TMEM204Q9BSN7 226 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 NCOR1P1Q9H4R4 102 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 HSPB7Q9UBY9 170 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 TMEM238C9JI98 176 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 F2RP25116 425 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 OR8B8Q15620 311 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 DCAF12Q5T6F0 453 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 FADS6Q8N9I5 356 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 OR2D3Q8NGH3 330 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 CST9LQ9H4G1 147 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 SLC35D1Q9NTN3 355 aa14.19□□□□□ -0.14
PMS1-213ENST00000441310 FRYQ5TBA9 3013 aa14.18□□□□□ -0.14
PMS1-213ENST00000441310 SPTBN2O15020 2390 aa14.18□□□□□ -0.14
PMS1-213ENST00000441310 SLC17A3O00476 420 aa14.18□□□□□ -0.14
PMS1-213ENST00000441310 ZNF16P17020 682 aaPredicted RBP14.18□□□□□ -0.14
PMS1-213ENST00000441310 OCIAD2Q56VL3 154 aa14.18□□□□□ -0.14
PMS1-213ENST00000441310 SLC25A53Q5H9E4 307 aa14.18□□□□□ -0.14
PMS1-213ENST00000441310 CSTL1Q9H114 145 aa14.18□□□□□ -0.14
PMS1-213ENST00000441310 GNB4Q9HAV0 340 aa14.18□□□□□ -0.14
PMS1-213ENST00000441310 LOC400499M0QZD8 3231 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms