RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLC24A4Q8NFF2 622 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR5T2Q8NGG2 359 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR10V1Q8NGI7 309 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 NEK7Q8TDX7 302 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 C17orf50Q8WW18 174 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 HPSE2Q8WWQ2 592 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 RTN4IP1Q8WWV3 396 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 DYRK2Q92630 601 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 GTF3AQ92664 365 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 TOMM40LQ969M1 308 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 MARC2Q969Z3 335 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 MRPL24Q96A35 216 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 C14orf79Q96F83 325 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 C18orf12Q96KH6 178 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 AQP10Q96PS8 301 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 MICU1Q9BPX6 476 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 RTL8AQ9BWD3 113 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 C1QTNF6Q9BXI9 259 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 PKIBQ9C010 78 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 FGF23Q9GZV9 251 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 LIME1Q9H400 295 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 NARFLQ9H6Q4 476 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 RHOFQ9HBH0 211 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPACA1Q9HBV2 294 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZC4H2Q9NQZ6 224 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 CYTL1Q9NRR1 136 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 MTCH1Q9NZJ7 389 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR5AC2Q9NZP5 309 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF629Q9UEG4 869 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 RALYQ9UKM9 306 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 LSM5Q9Y4Y9 91 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 MPDZO75970 2070 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 GON4LQ3T8J9 2241 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 CEP290O15078 2479 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 TRBV6-6A0A0A6YYG2 114 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 C3orf85A0A1B0GTC6 90 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 LRP5LA4QPB2 252 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 MSGN1A6NI15 193 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 PMS2P5A8MQ11 134 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 E5RGE8 158 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 F8WDY8 70 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 GPR31O00270 319 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 DEGS1O15121 323 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 BET1O15155 118 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 PHF1O43189 567 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SYNGR1O43759 233 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 DEDDO75618 318 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SCO1O75880 301 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 NAPSAO96009 420 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 APOC3P02656 99 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 GAPDHP04406 335 aaKnown RBP2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 HOXD4P09016 255 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SCTP09683 121 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 FREM3P0C091 2139 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 CFC1BP0CG36 223 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 CFC1P0CG37 223 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 FAM157CP0CG43 387 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 CBR1P16152 277 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF14P17017 642 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 PRKACAP17612 351 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGHV1-2P23083 117 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 TUBG1P23258 451 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 CA6P23280 308 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 MDH2P40926 338 aaKnown RBP2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 P2RY1P47900 373 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 RND3P61587 244 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 PPP1CBP62140 327 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 GABRA6Q16445 453 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SP6Q3SY56 376 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPIN3Q5JUX0 258 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 GPR157Q5UAW9 335 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR2A2Q6IF42 318 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR4A47Q6IF82 309 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SLC25A24Q6NUK1 477 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGFL2Q6UWQ7 119 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 FBXW12Q6X9E4 464 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 LYZL2Q7Z4W2 148 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 VASH2Q86V25 355 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 STHQ8IWL8 128 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 Q8IYB0 196 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPERTQ8NA61 448 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SUMF2Q8NBJ7 301 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 BHLHE23Q8NDY6 225 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 BPIFCQ8NFQ6 507 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 FDCSPQ8NFU4 85 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR1S2Q8NGQ3 325 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR11L1Q8NGX0 322 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 GLYATL2Q8WU03 294 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 ARL11Q969Q4 196 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 C17orf77Q96MU5 243 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM56Q96MV1 263 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 ASCL2Q99929 193 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 EGLN1Q9GZT9 426 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM222Q9H0R3 208 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR51B6Q9H340 312 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR51I2Q9H344 312 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 TAF9BQ9HBM6 251 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SCRT2Q9NQ03 307 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 ASCL3Q9NQ33 180 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms