RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 FGF5P12034 268 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 MMP16P51512 607 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 IL24Q13007 206 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 SLC35E3Q7Z769 313 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 ADIPOQQ15848 244 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 TRAV20A0A0B4J274 112 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 BSXQ3C1V8 233 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 AWAT1Q58HT5 328 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 ZNF645Q8N7E2 425 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 WFIKKN1Q96NZ8 548 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 GDF15Q99988 308 aa11.29□□□□□ -0.6
SPG11-202ENST00000427534 SSBP3Q9BWW4 388 aaPredicted RBP11.29□□□□□ -0.6
SPG11-202ENST00000427534 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
SPG11-202ENST00000427534 NUDT3O95989 172 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 CBLN2Q8IUK8 224 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 NAT8Q9UHE5 227 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 PLA2G10O15496 165 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 RECKO95980 971 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 CLRN3Q8NCR9 226 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 PHYHIPLQ96FC7 376 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 NUDT16L1Q9BRJ7 211 aaKnown RBP11.28□□□□□ -0.6
SPG11-202ENST00000427534 PPP1R17O96001 155 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 ZP4Q12836 540 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 FAM106AQ4KMX7 169 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 VN1R17PQ8TDU5 208 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 TPRP12270 2363 aaKnown RBP11.28□□□□□ -0.6
SPG11-202ENST00000427534 CLDN34H7C241 214 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 P2RY1P47900 373 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 OR5AU1Q8NGC0 362 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
SPG11-202ENST00000427534 F11RQ9Y624 299 aaKnown RBP11.28□□□□□ -0.6
SPG11-202ENST00000427534 CIDEAO60543 219 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 CXorf1O96002 111 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 ASAH2BP0C7U1 165 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 DLX6P56179 175 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 PCSK4Q6UW60 755 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 LOXL4Q96JB6 756 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 RAB33BQ9H082 229 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 FUT5Q11128 374 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 UNC119Q13432 240 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 ZNF79Q15937 498 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 ATP6V1FQ16864 119 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 LINC00469Q8N7U9 141 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
SPG11-202ENST00000427534 S1PR2O95136 353 aa11.27□□□□□ -0.6
SPG11-202ENST00000427534 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.6
SPG11-202ENST00000427534 OR11H7Q8NGC8 314 aa11.27□□□□□ -0.6
SPG11-202ENST00000427534 MANBALQ9NQG1 85 aa11.27□□□□□ -0.6
SPG11-202ENST00000427534 MIOXQ9UGB7 285 aa11.27□□□□□ -0.6
SPG11-202ENST00000427534 PAM16Q9Y3D7 125 aa11.27□□□□□ -0.6
SPG11-202ENST00000427534 QSER1Q2KHR3 1735 aa11.27□□□□□ -0.6
SPG11-202ENST00000427534 UNQ9370/PRO34162Q6UXP9 181 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 ELOVL1Q9BW60 279 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 SEC11CQ9BY50 192 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 GCM2O75603 506 aaPredicted RBP11.27□□□□□ -0.61
SPG11-202ENST00000427534 CSRP2Q16527 193 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 ZNF107Q9UII5 783 aaPredicted RBP11.27□□□□□ -0.61
SPG11-202ENST00000427534 MOB4Q9Y3A3 225 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 ZG16O60844 167 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 SLC25A42Q86VD7 318 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 KCNK7Q9Y2U2 307 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
SPG11-202ENST00000427534 HPRT1P00492 218 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 RELBQ01201 579 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 MBNL2Q5VZF2 373 aaKnown RBP11.27□□□□□ -0.61
SPG11-202ENST00000427534 C11orf68Q9H3H3 251 aaKnown RBP11.27□□□□□ -0.61
SPG11-202ENST00000427534 Q9N2K0 584 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 OR5AC2Q9NZP5 309 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 HSPB7Q9UBY9 170 aa11.27□□□□□ -0.61
SPG11-202ENST00000427534 SNRNP200O75643 2136 aaKnown RBP11.27□□□□□ -0.61
SPG11-202ENST00000427534 LIMS1P48059 325 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 SRSF6Q13247 344 aaKnown RBP11.26□□□□□ -0.61
SPG11-202ENST00000427534 SYT8Q8NBV8 401 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 BRWD3Q6RI45 1802 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 DUXBA0A1W2PPF3 345 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 MGST3O14880 152 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 MAPK1IP1LQ8NDC0 245 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 MESP1Q9BRJ9 268 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 NDUFB4O95168 129 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 CRHP06850 196 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 FAM3BP58499 235 aaPredicted RBP11.26□□□□□ -0.61
SPG11-202ENST00000427534 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
SPG11-202ENST00000427534 LDLRAD4O15165 306 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 C1QL1O75973 258 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 CD69Q07108 199 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 GABRA6Q16445 453 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 OR2T10Q8NGZ9 312 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 CORTO00230 105 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 MEOX2P50222 304 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 P2RY6Q15077 328 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 CD74P04233 296 aa11.26□□□□□ -0.61
SPG11-202ENST00000427534 RNF212Q495C1 297 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms