RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PAX5Q02548 391 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 PJVKQ0ZLH3 352 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 PPP1R8Q12972 351 aaKnown RBP4.54□□□□□ -1.68
SDCBP-203ENST00000424270 CBX3Q13185 183 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 GINS1Q14691 196 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 ICAM4Q14773 271 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 KISS1Q15726 138 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 FAM98BQ52LJ0 330 aaKnown RBP4.54□□□□□ -1.68
SDCBP-203ENST00000424270 RPL39P5Q59GN2 51 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 LIPKQ5VXJ0 399 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 UTS2BQ765I0 119 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 CROCCP2Q86T23 111 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 STHQ8IWL8 128 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 ODF3L1Q8IXM7 274 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 DRAXINQ8NBI3 349 aaPredicted RBP4.54□□□□□ -1.68
SDCBP-203ENST00000424270 OR10AC1Q8NH08 325 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 IL1F10Q8WWZ1 152 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 TAF9BQ9HBM6 251 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 JPT1Q9UK76 154 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 CELA1Q9UNI1 258 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 C15orf61A6NNL5 157 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 B2RBV5 119 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 NME4O00746 187 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 NDUFAB1O14561 156 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 CTSDP07339 412 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-203ENST00000424270 CT45A6P0DMU7 189 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 CT45A5P0DMU8 189 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 CT45A7P0DMV0 189 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 RPA2P15927 270 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 FUSP35637 526 aaKnown RBP eCLIP4.53□□□□□ -1.68
SDCBP-203ENST00000424270 MAGOHP61326 146 aaKnown RBP4.53□□□□□ -1.68
SDCBP-203ENST00000424270 HAMPP81172 84 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 SLC22A6Q4U2R8 563 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 ZNF691Q5VV52 312 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 TMEM244Q5VVB8 128 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 FAM71F2Q6NXP2 309 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 C16orf54Q6UWD8 224 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 ZNF497Q6ZNH5 498 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 Q6ZSR3 168 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 OR52N1Q8NH53 320 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 EEF1AKMT3Q96AZ1 226 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 PELI1Q96FA3 418 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 FAM210BQ96KR6 192 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 CMTM3Q96MX0 182 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 CLUHP3Q96NS8 147 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 SULT4A1Q9BR01 284 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 C20orf24Q9BUV8 137 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 MRGBPQ9NV56 204 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 H2AFY2Q9P0M6 372 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-203ENST00000424270 ZNF581Q9P0T4 197 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 ABRACLQ9P1F3 81 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 TBC1D24Q9ULP9 559 aa4.53□□□□□ -1.68
SDCBP-203ENST00000424270 GEMIN2O14893 280 aaKnown RBP4.52□□□□□ -1.69
SDCBP-203ENST00000424270 PLA2G1BP04054 148 aaKnown RBP4.52□□□□□ -1.69
SDCBP-203ENST00000424270 IGKV1-16P04430 117 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 RCC1P18754 421 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-203ENST00000424270 SERPINA2P20848 420 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 ATP6V1B2P21281 511 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 VSNL1P62760 191 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 PLA2G7Q13093 441 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 ELP2Q6IA86 826 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 UNQ9165/PRO28630Q6UXU0 137 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 NKAIN3Q8N8D7 197 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 GALMQ96C23 342 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 ABHD14BQ96IU4 210 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 HOPXQ9BPY8 73 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-203ENST00000424270 METTL9Q9H1A3 318 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 REEP1Q9H902 201 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 ADGRL4Q9HBW9 690 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 ARL8BQ9NVJ2 186 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 GNG8Q9UK08 70 aa4.52□□□□□ -1.69
SDCBP-203ENST00000424270 SAMHD1Q9Y3Z3 626 aaKnown RBP4.52□□□□□ -1.69
SDCBP-203ENST00000424270 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 METTL15A6NJ78 407 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 ATP8B1O43520 1251 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SNX3O60493 162 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 EIF4EBP3O60516 100 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-203ENST00000424270 YPEL1O60688 119 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 CDRT1O95170 752 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 IGLV2-23P01705 113 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SPART-AS1P0CW21 52 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 DEFA4P12838 97 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 FUT3P21217 361 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 GALP22466 123 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SLC2A5P22732 501 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 ATP6V1E1P36543 226 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 RBM11P57052 281 aaKnown RBP4.51□□□□□ -1.69
SDCBP-203ENST00000424270 RPS27AP62979 156 aaKnown RBP4.51□□□□□ -1.69
SDCBP-203ENST00000424270 PAFAH1B2P68402 229 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 TMEM41BQ5BJD5 291 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 NXNL2Q5VZ03 156 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 LEMD1Q68G75 181 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 DMKNQ6E0U4 476 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-203ENST00000424270 C8orf82Q6P1X6 216 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-203ENST00000424270 TMEM88Q6PEY1 159 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 PLET1Q6UQ28 207 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SLC25A42Q86VD7 318 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 PDPNQ86YL7 162 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 PRSS35Q8N3Z0 413 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 GBGT1Q8N5D6 347 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms