RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RGS5O15539 181 aa11.63□□□□□ -0.55
CHD1-202ENST00000414220 HPGDSO60760 199 aa11.63□□□□□ -0.55
CHD1-202ENST00000414220 NDUFA3O95167 84 aa11.63□□□□□ -0.55
CHD1-202ENST00000414220 EIF4EP06730 217 aaKnown RBP11.63□□□□□ -0.55
CHD1-202ENST00000414220 FCGR2CP31995 323 aa11.63□□□□□ -0.55
CHD1-202ENST00000414220 CD83Q01151 205 aa11.63□□□□□ -0.55
CHD1-202ENST00000414220 CDK10Q15131 360 aa11.63□□□□□ -0.55
CHD1-202ENST00000414220 ZNF383Q8NA42 475 aa11.63□□□□□ -0.55
CHD1-202ENST00000414220 FAM110DQ8TAY7 271 aaPredicted RBP11.63□□□□□ -0.55
CHD1-202ENST00000414220 ZFP57Q9NU63 452 aa11.63□□□□□ -0.55
CHD1-202ENST00000414220 ANK2Q01484 3957 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 MEIS3P1A6NDR6 274 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 CCDC160A6NGH7 325 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 SULT1C2O00338 296 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 SHOXO15266 292 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 PROP1O75360 226 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 TUSC2O75896 110 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 TPPPO94811 219 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 PF4V1P10720 104 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 PTHLHP12272 177 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 ELK1P19419 428 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 HERV-K104P61576 105 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 TMEM267Q0VDI3 215 aaPredicted RBP11.62□□□□□ -0.55
CHD1-202ENST00000414220 ZNF660Q6AZW8 331 aaPredicted RBP11.62□□□□□ -0.55
CHD1-202ENST00000414220 ZNF329Q86UD4 541 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 ZBTB34Q8NCN2 500 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 OR5H2Q8NGV7 314 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 R3HDM4Q96D70 268 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 NOL4LQ96MY1 436 aaPredicted RBP11.62□□□□□ -0.55
CHD1-202ENST00000414220 OR51J1Q9H342 316 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 METTL1Q9UBP6 276 aaKnown RBP11.62□□□□□ -0.55
CHD1-202ENST00000414220 LINC00527Q9UJ94 153 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 ZNF580Q9UK33 172 aa11.62□□□□□ -0.55
CHD1-202ENST00000414220 IGF1P05019 195 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 FCER2P06734 321 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 CNTFRP26992 372 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
CHD1-202ENST00000414220 PSG5Q15238 335 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 MSMO1Q15800 293 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 CXorf66Q5JRM2 361 aaPredicted RBP11.61□□□□□ -0.55
CHD1-202ENST00000414220 SNX29P2Q8IUI4 249 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 BVESQ8NE79 360 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 ABHD5Q8WTS1 349 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 GIMAP1Q8WWP7 306 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 RITA1Q96K30 269 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 HSD17B10Q99714 261 aaKnown RBP11.61□□□□□ -0.55
CHD1-202ENST00000414220 DCUN1D5Q9BTE7 237 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 FBXL15Q9H469 300 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 EHFQ9NZC4 300 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 RABL2AQ9UBK7 228 aaPredicted RBP11.61□□□□□ -0.55
CHD1-202ENST00000414220 EXTL2Q9UBQ6 330 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 RABL2BQ9UNT1 228 aa11.61□□□□□ -0.55
CHD1-202ENST00000414220 RBMX2Q9Y388 322 aaKnown RBP11.61□□□□□ -0.55
CHD1-202ENST00000414220 TET2Q6N021 2002 aaPredicted RBP11.6□□□□□ -0.55
CHD1-202ENST00000414220 PPYP01298 95 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 ELANEP08246 267 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 CD40LGP29965 261 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 SLC6A1P30531 599 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 TSPAN5P62079 268 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 CATR1Q13166 79 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 SPCS2Q15005 226 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 VMA21Q3ZAQ7 101 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 TMEM177Q53S58 311 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 TMEM65Q6PI78 240 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 ZNF66Q6ZN08 573 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 KCTD9Q7L273 389 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 OSR1Q8TAX0 266 aaPredicted RBP11.6□□□□□ -0.55
CHD1-202ENST00000414220 GPX8Q8TED1 209 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 SECTM1Q8WVN6 248 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 HARBI1Q96MB7 349 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 HSPB9Q9BQS6 159 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 SLC5A7Q9GZV3 580 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 PARP11Q9NR21 331 aa11.6□□□□□ -0.55
CHD1-202ENST00000414220 CCDC59Q9P031 241 aaKnown RBP11.6□□□□□ -0.55
CHD1-202ENST00000414220 A0A1W2PRX2 142 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 LINC01548A6NM66 108 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 CREBL2O60519 120 aaPredicted RBP11.59□□□□□ -0.55
CHD1-202ENST00000414220 FCGR3BO75015 233 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 TSPAN15O95858 294 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 PF4P02776 101 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 IGKV1-16P04430 117 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 NAT1P18440 290 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 AADACP22760 399 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 S100GP29377 79 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 RCVRNP35243 200 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 KIR2DS2P43631 304 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 DYRK1AQ13627 763 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 ACTBL2Q562R1 376 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 OVCH2Q7RTZ1 564 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 OR6F1Q8NGZ6 308 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 SNAPC3Q92966 411 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 AIFM2Q9BRQ8 373 aa11.59□□□□□ -0.55
CHD1-202ENST00000414220 IGHV7-81A0A0B4J1V7 117 aa11.58□□□□□ -0.56
CHD1-202ENST00000414220 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.56
CHD1-202ENST00000414220 NUDT19A8MXV4 375 aa11.58□□□□□ -0.56
CHD1-202ENST00000414220 SLC25A17O43808 307 aa11.58□□□□□ -0.56
CHD1-202ENST00000414220 CNIH1O95406 144 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms