RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 IGHV3-72A0A0B4J1Y9 119 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 TRAV41A0A0B4J266 112 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 IGKV1-6A0A0C4DH72 117 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 ADARB2-AS1A8MUL3 147 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 RBFOX2O43251 390 aaKnown RBP eCLIP5.03□□□□□ -1.6
USP54-202ENST00000413442 WIPF1O43516 503 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 RAMP3O60896 148 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 TUSC2O75896 110 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 HRASP01112 189 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 IGLV1-40P01703 118 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 PF4P02776 101 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 SNRPBP14678 240 aaKnown RBP5.03□□□□□ -1.6
USP54-202ENST00000413442 ZNF182P17025 639 aaPredicted RBP5.03□□□□□ -1.6
USP54-202ENST00000413442 NAT1P18440 290 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 PSMB8P28062 276 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 S100GP29377 79 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 MAS1LP35410 378 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 OR3A3P47888 321 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 TAS2R46P59540 309 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 RPL23AP62750 156 aaKnown RBP5.03□□□□□ -1.6
USP54-202ENST00000413442 CFHR3Q02985 330 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 MXD1Q05195 221 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 PLGLAQ15195 96 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 NSUN5P1Q3KNT7 163 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 VMA21Q3ZAQ7 101 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 IGSF11Q5DX21 431 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 Q6ZPA2 131 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 SLC25A42Q86VD7 318 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 BEST4Q8NFU0 473 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 UBALD1Q8TB05 177 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 LGALS14Q8TCE9 139 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 DPF1Q92782 380 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 HDHD3Q9BSH5 251 aaPredicted RBP5.03□□□□□ -1.6
USP54-202ENST00000413442 FUNDC2Q9BWH2 189 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 MRPL20Q9BYC9 149 aaKnown RBP5.03□□□□□ -1.6
USP54-202ENST00000413442 MRPS26Q9BYN8 205 aaKnown RBP5.03□□□□□ -1.6
USP54-202ENST00000413442 OR2D2Q9H210 308 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 AUNIPQ9H7T9 357 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 SLC35D1Q9NTN3 355 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 SDHAF2Q9NX18 166 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 OR1A1Q9P1Q5 309 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 VSIG4Q9Y279 399 aa5.03□□□□□ -1.6
USP54-202ENST00000413442 PKD1L1Q8TDX9 2849 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 A0A075B6Q4 140 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 IGHV7-81A0A0B4J1V7 117 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 ZNF736B4DX44 427 aaPredicted RBP5.02□□□□□ -1.61
USP54-202ENST00000413442 M0R1X1 148 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 SHOXO15266 292 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 TSPAN15O95858 294 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 OR8U8P0C7N1 319 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 TBPP20226 339 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 AADACP22760 399 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 DUTP33316 252 aaKnown RBP5.02□□□□□ -1.61
USP54-202ENST00000413442 PRSS3P35030 304 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 RAB9AP51151 201 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 TMBIM6P55061 237 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 UBE2KP61086 200 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 CX3CL1P78423 397 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 MRPS10P82664 201 aaKnown RBP5.02□□□□□ -1.61
USP54-202ENST00000413442 SSBP1Q04837 148 aaKnown RBP5.02□□□□□ -1.61
USP54-202ENST00000413442 CATR1Q13166 79 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 CDK10Q15131 360 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 PSG5Q15238 335 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 RPL39P5Q59GN2 51 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 TCTEX1D4Q5JR98 221 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 TMEM69Q5SWH9 247 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 SAMD5Q5TGI4 173 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 DMRTA1Q5VZB9 504 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 FAM131AQ6UXB0 335 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 OVCH2Q7RTZ1 564 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 MMD2Q8IY49 270 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 ZNF383Q8NA42 475 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 OR4A5Q8NH83 315 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 MYOZ3Q8TDC0 251 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 C4orf3Q8WVX3 66 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 DDB2Q92466 427 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 USMG5Q96IX5 58 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 P2RX4Q99571 388 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 KCNK15Q9H427 330 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 METTL1Q9UBP6 276 aaKnown RBP5.02□□□□□ -1.61
USP54-202ENST00000413442 ADAM30Q9UKF2 790 aa5.02□□□□□ -1.61
USP54-202ENST00000413442 FOXA2Q9Y261 457 aaPredicted RBP5.02□□□□□ -1.61
USP54-202ENST00000413442 TMEM235A6NFC5 223 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 NUDT19A8MXV4 375 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 CCL24O00175 119 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 CYB5BO43169 146 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 ACTL6BO94805 426 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 GABARAPO95166 117 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 CNIH1O95406 144 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 CRYGBP07316 175 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 DEFA6Q01524 100 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 PLA2G7Q13093 441 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 DYRK1AQ13627 763 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 TATDN3Q17R31 274 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 BEAN1Q3B7T3 259 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 PDLIM3Q53GG5 364 aaPredicted RBP5.01□□□□□ -1.61
USP54-202ENST00000413442 ACTBL2Q562R1 376 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 GPR107Q5VW38 600 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 THOC7Q6I9Y2 204 aaKnown RBP5.01□□□□□ -1.61
USP54-202ENST00000413442 FAM53AQ6NSI3 398 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms