RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CLCC1Q96S66 551 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 CENPOQ9BU64 300 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 GNB4Q9HAV0 340 aa13.79□□□□□ -0.2
LSM5-204ENST00000409909 METTL1Q9UBP6 276 aaKnown RBP13.79□□□□□ -0.2
LSM5-204ENST00000409909 K7EIL1 84 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 SOX15O60248 233 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 DTYMKP23919 212 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 RAB9AP51151 201 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 RAB25P57735 213 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 RPS16P62249 146 aaKnown RBP13.78□□□□□ -0.2
LSM5-204ENST00000409909 ARL6IP1Q15041 203 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 ECSCRQ19T08 205 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 TMEM65Q6PI78 240 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 PDPNQ86YL7 162 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 H1FOOQ8IZA3 346 aaPredicted RBP13.78□□□□□ -0.2
LSM5-204ENST00000409909 UBE2E2Q96LR5 201 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 ST6GALNAC5Q9BVH7 336 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 TPSG1Q9NRR2 321 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 NUBP2Q9Y5Y2 271 aa13.78□□□□□ -0.2
LSM5-204ENST00000409909 WI2-2373I1.2A0A1W2PRP0 233 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 TMEM235A6NFC5 223 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 I3L521 148 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 SSX5O60225 188 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 APOA2P02652 100 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 FHL3Q13643 280 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 ZNF260Q3ZCT1 412 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 OR5H6Q8NGV6 325 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 CASTOR1Q8WTX7 329 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 NUDCD2Q8WVJ2 157 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 FLYWCH2Q96CP2 140 aaKnown RBP13.77□□□□□ -0.21
LSM5-204ENST00000409909 TSNAXQ99598 290 aaKnown RBP13.77□□□□□ -0.21
LSM5-204ENST00000409909 GINS4Q9BRT9 223 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 FAM103A1Q9BTL3 118 aaKnown RBP13.77□□□□□ -0.21
LSM5-204ENST00000409909 MCRIP2Q9BUT9 160 aaKnown RBP13.77□□□□□ -0.21
LSM5-204ENST00000409909 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 A3GALT2U3KPV4 340 aa13.77□□□□□ -0.21
LSM5-204ENST00000409909 CA2P00918 260 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 IGLV2-23P01705 113 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 ZNF562Q6V9R5 426 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 PPP1R27Q86WC6 154 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 OR11H1Q8NG94 326 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 SLC25A38Q96DW6 304 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 OR5B12Q96R08 314 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 GPR61Q9BZJ8 451 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 RHBDL2Q9NX52 303 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 VSIG4Q9Y279 399 aa13.76□□□□□ -0.21
LSM5-204ENST00000409909 A0A1W2PN81 502 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 SLC25A17O43808 307 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 SPDEFO95238 335 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 CHRNA7P36544 502 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 TGFBR1P36897 503 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 GNB1P62873 340 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 SSBP2P81877 361 aaPredicted RBP13.75□□□□□ -0.21
LSM5-204ENST00000409909 RUNX1Q01196 453 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 IDNKQ5T6J7 187 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 ASPHD1Q5U4P2 390 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 ABHD5Q8WTS1 349 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 DCSTAMPQ9H295 470 aa13.75□□□□□ -0.21
LSM5-204ENST00000409909 FOXA2Q9Y261 457 aaPredicted RBP13.75□□□□□ -0.21
LSM5-204ENST00000409909 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
LSM5-204ENST00000409909 SRRM4A7MD48 611 aaKnown RBP13.74□□□□□ -0.21
LSM5-204ENST00000409909 ARPC1BO15143 372 aaKnown RBP13.74□□□□□ -0.21
LSM5-204ENST00000409909 SCGNO76038 276 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 CRYGBP07316 175 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 LUMP51884 338 aaPredicted RBP13.74□□□□□ -0.21
LSM5-204ENST00000409909 SCAND1P57086 179 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 PJVKQ0ZLH3 352 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 AKIRIN2Q53H80 203 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 BVESQ8NE79 360 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 LFNGQ8NES3 379 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 OR1N2Q8NGR9 330 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 DDB2Q92466 427 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 DPF1Q92782 380 aa13.74□□□□□ -0.21
LSM5-204ENST00000409909 DNAH9Q9NYC9 4486 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 LINC00473A8K010 186 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 J3QRK9 145 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 NFYAP23511 347 aaPredicted RBP13.73□□□□□ -0.21
LSM5-204ENST00000409909 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
LSM5-204ENST00000409909 LGALS7P47929 136 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 GNG2P59768 71 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 PITPNAQ00169 270 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 TMEM267Q0VDI3 215 aaPredicted RBP13.73□□□□□ -0.21
LSM5-204ENST00000409909 FXYD3Q14802 87 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 TMEM177Q53S58 311 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 ACTBL2Q562R1 376 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 UNQ5815/PRO19632Q6UWF5 114 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 TCTEX1D1Q8N7M0 179 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 ALX4Q9H161 411 aaPredicted RBP13.73□□□□□ -0.21
LSM5-204ENST00000409909 ETV7Q9Y603 341 aa13.73□□□□□ -0.21
LSM5-204ENST00000409909 TRAV18A0A075B6X5 111 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 HLA-DQB1P01920 261 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 CTXN2P0C2S0 81 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 TAGLNQ01995 201 aaKnown RBP13.72□□□□□ -0.21
LSM5-204ENST00000409909 MRGPRG-AS1Q2M3A8 158 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 CNIH2Q6PI25 160 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 TSPAN14Q8NG11 270 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 ARPC1AQ92747 370 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 YIPF6Q96EC8 236 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 HARBI1Q96MB7 349 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms