RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MCFD2Q8NI22 146 aa15.71■□□□□ 0.11
PDLIM2-207ENST00000409417 DIRAS2Q96HU8 199 aa15.71■□□□□ 0.11
PDLIM2-207ENST00000409417 EHFQ9NZC4 300 aa15.71■□□□□ 0.11
PDLIM2-207ENST00000409417 NDUFA3O95167 84 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 PMP2P02689 132 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 CNTFRP26992 372 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 HLA-DMAP28067 261 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 DUTP33316 252 aaKnown RBP15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 DYRK1AQ13627 763 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 SLC35E3Q7Z769 313 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 SGMS2Q8NHU3 365 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 FLYWCH2Q96CP2 140 aaKnown RBP15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 DCUN1D5Q9BTE7 237 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 SLC35D1Q9NTN3 355 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 KIAA1456Q9P272 454 aa15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 RBMX2Q9Y388 322 aaKnown RBP15.71■□□□□ 0.1
PDLIM2-207ENST00000409417 HRH1P35367 487 aa15.7■□□□□ 0.1
PDLIM2-207ENST00000409417 MSMO1Q15800 293 aa15.7■□□□□ 0.1
PDLIM2-207ENST00000409417 C5orf64Q2M2E5 130 aa15.7■□□□□ 0.1
PDLIM2-207ENST00000409417 ZNF660Q6AZW8 331 aaPredicted RBP15.7■□□□□ 0.1
PDLIM2-207ENST00000409417 OR52I2Q8NH67 350 aa15.7■□□□□ 0.1
PDLIM2-207ENST00000409417 RABL2AQ9UBK7 228 aaPredicted RBP15.7■□□□□ 0.1
PDLIM2-207ENST00000409417 RABL2BQ9UNT1 228 aa15.7■□□□□ 0.1
PDLIM2-207ENST00000409417 MGAM2Q2M2H8 2515 aa15.7■□□□□ 0.1
PDLIM2-207ENST00000409417 LINC00473A8K010 186 aa15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 KCNAB3O43448 404 aa15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 RRASP10301 218 aa15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 RPS16P62249 146 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 RTL8BQ17RB0 113 aa15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 CENPVQ7Z7K6 275 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 SECTM1Q8WVN6 248 aa15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 DDB2Q92466 427 aa15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 TSNAXQ99598 290 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 KLK11Q9UBX7 282 aa15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 MTFP1Q9UDX5 166 aa15.69■□□□□ 0.1
PDLIM2-207ENST00000409417 LINC01548A6NM66 108 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 RRHO14718 337 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 HLA-DRB1P01911 266 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 LGALS7P47929 136 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 MRPS10P82664 201 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 CBX3Q13185 183 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 FOXRED2Q8IWF2 684 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 C11orf44Q8N8P7 122 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 OR5AU1Q8NGC0 362 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 CHPT1Q8WUD6 406 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 FCAMRQ8WWV6 532 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 DGCR14Q96DF8 476 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 HSD17B10Q99714 261 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 MMP27Q9H306 513 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 NDUFA13Q9P0J0 144 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 ZNF107Q9UII5 783 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 A3GALT2U3KPV4 340 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 WNK1Q9H4A3 2382 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 PKD1L1Q8TDX9 2849 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 TRRAPQ9Y4A5 3859 aa15.68■□□□□ 0.1
PDLIM2-207ENST00000409417 AP4M1O00189 453 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 FBXO24O75426 580 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 FXYD4P59646 89 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 HERV-K104P61576 105 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 EIF4EBP1Q13541 118 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 RNASE12Q5GAN4 147 aaKnown RBP15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 PYHIN1Q6K0P9 492 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 LIN54Q6MZP7 749 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 ZBTB34Q8NCN2 500 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 OR6F1Q8NGZ6 308 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 NOL4LQ96MY1 436 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 HSPB9Q9BQS6 159 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 ZNF2Q9BSG1 426 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 SLC5A7Q9GZV3 580 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 CCL28Q9NRJ3 127 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 VWFP04275 2813 aa15.67■□□□□ 0.1
PDLIM2-207ENST00000409417 GABARAPH6UMI1 98 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 SPDEFO95238 335 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 TNFSF8P32971 234 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 IL18Q14116 193 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 PSG5Q15238 335 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 TMEM177Q53S58 311 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 ACTBL2Q562R1 376 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 ZNF66Q6ZN08 573 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 KCTD9Q7L273 389 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 TMEM17Q86X19 198 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 BVESQ8NE79 360 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 MOB3AQ96BX8 217 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 FBXL15Q9H469 300 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 PRELID3BQ9Y3B1 194 aa15.66■□□□□ 0.1
PDLIM2-207ENST00000409417 CD28P10747 220 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 DGCR2P98153 550 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 SSBP1Q04837 148 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 PLGLAQ15195 96 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 VAX1Q5SQQ9 334 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 STPG2Q8N412 459 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 SMIM4Q8WVI0 70 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 TAS2R8Q9NYW2 309 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 PSMB11A5LHX3 300 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 M0QZ24 198 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 CTDSPLO15194 276 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 IGF1P05019 195 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 TBPP20226 339 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 TSPAN5P62079 268 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 RPL30P62888 115 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms