RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ZMYND19Q96E35 227 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 MRPL48Q96GC5 212 aaKnown RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 PGLYRP3Q96LB9 341 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 SCGB3A2Q96PL1 93 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 CAMK2N2Q96S95 79 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 NMNAT3Q96T66 252 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 AGMATQ9BSE5 352 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC22A4Q9H015 551 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 C12orf10Q9HB07 376 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF331Q9NQX6 463 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 DHCR7Q9UBM7 475 aaKnown RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 MTFP1Q9UDX5 166 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 MYO7AQ13402 2215 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 PRRC2BQ5JSZ5 2229 aaKnown RBP3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 PCM1Q15154 2024 aa3.17□□□□□ -1.9
HMGB3P18-201ENST00000406327 COL4A2P08572 1712 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRPM6Q9BX84 2022 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 A0A1W2PQD3 144 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 FAM25AB3EWG3 89 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 FAM25CB3EWG5 89 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 FAM25GB3EWG6 89 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 MAGEB4O15481 346 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 FADS1O60427 444 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC16A7O60669 478 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 CCNKO75909 580 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 ARL6IP5O75915 188 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 UCHL1P09936 223 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRAPPC2P0DI81 140 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRAPPC2BP0DI82 140 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 PGA5P0DJD9 388 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 PSG2P11465 335 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 CCNOP22674 350 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 DTYMKP23919 212 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 CXCR1P25024 350 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 IL12BP29460 328 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 HOXA6P31267 233 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 SSTR5P35346 364 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 ARR3P36575 388 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 RPS10P46783 165 aaKnown RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 GDI2P50395 445 aaKnown RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF133P52736 654 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR10A3P58181 314 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 TAS2R60P59551 318 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 RPS11P62280 158 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF117Q03924 483 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF266Q14584 549 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 CDK5R1Q15078 307 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 EBPQ15125 230 aaKnown RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 KCNJ8Q15842 424 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 RSPO1Q2MKA7 263 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF684Q5T5D7 378 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 FAM27D1Q5T7N8 215 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 LINC01590Q5TEZ4 76 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 SFXN4Q6P4A7 337 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 PLET1Q6UQ28 207 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 LINC01551Q86U37 167 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 MARCH3Q86UD3 253 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 LRRC28Q86X40 367 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 Q8N402 240 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 C19orf18Q8NEA5 215 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR10AD1Q8NGE0 317 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF563Q8TA94 476 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 LRRC20Q8TCA0 184 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 GPR119Q8TDV5 335 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 SMIM19Q96E16 107 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 Q96M85 177 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 CHAC1Q9BUX1 264 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC25A39Q9BZJ4 359 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 NDEL1Q9GZM8 345 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 TOLLIPQ9H0E2 274 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 EDA2RQ9HAV5 297 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 INIPQ9NRY2 104 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 RBFOX1Q9NWB1 397 aaKnown RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 TAS2R5Q9NYW4 299 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 PAIP2BQ9ULR5 123 aaKnown RBP3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRANK1O15050 2925 aa3.16□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGLV3-12A0A075B6K2 115 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 TRAV36DV7A0A075B6V5 113 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMED7-TICAM2A0A0A6YYA0 188 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 A0A0G2JMP0 313 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 A0A0X1KG70 313 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 A0A1W2PRG6 482 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR6C70A6NIJ9 312 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 H7C1H1 209 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 PIN1P1O15428 100 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 LYRM1O43325 122 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 RAD1O60671 282 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 RP2O75695 350 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 PAHP00439 452 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 PGA4P0DJD7 388 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 PGA3P0DJD8 388 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 IGHV1-8P0DP01 117 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 CD37P11049 281 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 TCN2P20062 427 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 MDKP21741 143 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 HLA-DMAP28067 261 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 TALDO1P37837 337 aa3.15□□□□□ -1.91
HMGB3P18-201ENST00000406327 CCR6P51684 374 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms