RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 OR10G9Q8NGN4 311 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 OR10G7Q8NGN6 311 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 DTD1Q8TEA8 209 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 OR5H1A6NKK0 313 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 ZNF729A6NN14 1252 aaPredicted RBP21.4■■□□□ 1.02
COL13A1-203ENST00000398969 TLE1Q04724 770 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 Q6ZR03 302 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 C16orf82Q7Z2V1 217 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 NINJ1Q92982 152 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 ZDHHC16Q969W1 377 aa21.4■■□□□ 1.02
COL13A1-203ENST00000398969 MRPL37Q9BZE1 423 aaKnown RBP21.4■■□□□ 1.02
COL13A1-203ENST00000398969 TMEM250H0YL14 139 aa21.39■■□□□ 1.02
COL13A1-203ENST00000398969 CLDN14O95500 239 aa21.39■■□□□ 1.02
COL13A1-203ENST00000398969 MBP02144 154 aa21.39■■□□□ 1.02
COL13A1-203ENST00000398969 ARG2P78540 354 aa21.39■■□□□ 1.02
COL13A1-203ENST00000398969 GCNT2Q8N0V5 402 aa21.39■■□□□ 1.02
COL13A1-203ENST00000398969 OR10P1Q8NGE3 313 aa21.39■■□□□ 1.02
COL13A1-203ENST00000398969 MRGPRDQ8TDS7 321 aa21.39■■□□□ 1.02
COL13A1-203ENST00000398969 RPUSD4Q96CM3 377 aaKnown RBP21.39■■□□□ 1.02
COL13A1-203ENST00000398969 ZNF292O60281 2723 aa21.39■■□□□ 1.01
COL13A1-203ENST00000398969 TFF1P04155 84 aa21.39■■□□□ 1.01
COL13A1-203ENST00000398969 TFF3Q07654 80 aa21.39■■□□□ 1.01
COL13A1-203ENST00000398969 INO80CQ6PI98 192 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-203ENST00000398969 PTPRBP23467 1997 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 RAB29O14966 203 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 MDKP21741 143 aaPredicted RBP21.38■■□□□ 1.01
COL13A1-203ENST00000398969 NBL1P41271 181 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 GABRA2P47869 451 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 RPL23P62829 140 aaKnown RBP21.38■■□□□ 1.01
COL13A1-203ENST00000398969 BSXQ3C1V8 233 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 FFAR4Q5NUL3 377 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 OR10A7Q8NGE5 316 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 FRYQ5TBA9 3013 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 GTF3C1Q12789 2109 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 PFN1P07737 140 aaKnown RBP21.38■■□□□ 1.01
COL13A1-203ENST00000398969 FABP4P15090 132 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 RPS16P62249 146 aaKnown RBP21.38■■□□□ 1.01
COL13A1-203ENST00000398969 C9orf152Q5JTZ5 239 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 IGF2-ASQ6U949 168 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 ACP7Q6ZNF0 438 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 GATAD1Q8WUU5 269 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 SNX22Q96L94 193 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 NPCDR1Q9BY65 106 aa21.38■■□□□ 1.01
COL13A1-203ENST00000398969 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.37■■□□□ 1.01
COL13A1-203ENST00000398969 PYGO2Q9BRQ0 406 aa21.37■■□□□ 1.01
COL13A1-203ENST00000398969 PARLQ9H300 379 aa21.37■■□□□ 1.01
COL13A1-203ENST00000398969 DIDO1Q9BTC0 2240 aaKnown RBP21.37■■□□□ 1.01
COL13A1-203ENST00000398969 PMP22Q01453 160 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 VWC2Q2TAL6 325 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 H2BFWTQ7Z2G1 175 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 TCTEX1D1Q8N7M0 179 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 OR4X1Q8NH49 305 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 CIB3Q96Q77 187 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-203ENST00000398969 PFDN5Q99471 154 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 ACTR3CQ9C0K3 210 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-203ENST00000398969 PRDM13Q9H4Q3 707 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 SRD5A3Q9H8P0 318 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 MANBALQ9NQG1 85 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 RIF1Q5UIP0 2472 aaKnown RBP21.36■■□□□ 1.01
COL13A1-203ENST00000398969 COX5AP20674 150 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 TMPRSS7Q7RTY8 843 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 TMEM178AQ8NBL3 297 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 PRR7Q8TB68 274 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 CXXC4Q9H2H0 198 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 CLCF1Q9UBD9 225 aa21.36■■□□□ 1.01
COL13A1-203ENST00000398969 HIST1H1BP16401 226 aaKnown RBP21.35■■□□□ 1.01
COL13A1-203ENST00000398969 SSTR5P35346 364 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 PRAMEF6Q5VXH4 476 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 OR4F5Q8NH21 305 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 RAB24Q969Q5 203 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 OR4F4Q96R69 305 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 TAAR6Q96RI8 345 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 LINC00473A8K010 186 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 WT1P19544 449 aaPredicted RBP21.35■■□□□ 1.01
COL13A1-203ENST00000398969 SPINK9Q5DT21 86 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 WDR82Q6UXN9 313 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 Q6ZT83 130 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 TPRX1Q8N7U7 411 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 NECAP1Q8NC96 275 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 METRNQ9UJH8 293 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 PITPNC1Q9UKF7 332 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 ASPMQ8IZT6 3477 aa21.35■■□□□ 1.01
COL13A1-203ENST00000398969 GATCO43716 136 aaKnown RBP21.34■■□□□ 1.01
COL13A1-203ENST00000398969 LINC00205P59089 165 aa21.34■■□□□ 1.01
COL13A1-203ENST00000398969 ZNF66Q6ZN08 573 aa21.34■■□□□ 1.01
COL13A1-203ENST00000398969 OR13A1Q8NGR1 328 aa21.34■■□□□ 1.01
COL13A1-203ENST00000398969 LAMP3Q9UQV4 416 aa21.34■■□□□ 1.01
COL13A1-203ENST00000398969 IGHV3-43A0A0B4J1X8 118 aa21.34■■□□□ 1.01
COL13A1-203ENST00000398969 RBMXL2O75526 392 aaKnown RBP21.34■■□□□ 1.01
COL13A1-203ENST00000398969 IGHV3-43DP0DP04 118 aa21.34■■□□□ 1.01
COL13A1-203ENST00000398969 FAM214BQ7L5A3 538 aa21.34■■□□□ 1.01
COL13A1-203ENST00000398969 OR51G1Q8NGK1 321 aa21.34■■□□□ 1.01
COL13A1-203ENST00000398969 USF3Q68DE3 2245 aa21.33■■□□□ 1.01
COL13A1-203ENST00000398969 NDUFS6O75380 124 aaKnown RBP21.33■■□□□ 1.01
COL13A1-203ENST00000398969 AGFG2O95081 481 aa21.33■■□□□ 1.01
COL13A1-203ENST00000398969 CCL11P51671 97 aa21.33■■□□□ 1.01
COL13A1-203ENST00000398969 DNLZQ5SXM8 178 aa21.33■■□□□ 1.01
COL13A1-203ENST00000398969 ZNF709Q8N972 641 aa21.33■■□□□ 1.01
COL13A1-203ENST00000398969 HIST1H2BLQ99880 126 aa21.33■■□□□ 1.01
COL13A1-203ENST00000398969 UFSP2Q9NUQ7 469 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms