RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 LINC01551Q86U37 167 aa20.26■□□□□ 0.83
CSNK1E-203ENST00000396832 MRPS17Q9Y2R5 130 aaKnown RBP20.26■□□□□ 0.83
CSNK1E-203ENST00000396832 MLNRO43193 412 aa20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 SOX8P57073 446 aa20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 TPTE2P1Q5T6R2 138 aa20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 TEX43Q6ZNM6 134 aa20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 DTD1Q8TEA8 209 aa20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 WDR54Q9H977 334 aa20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 EGR1P18146 543 aa20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 ADMP35318 185 aa20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 UBE2NP61088 152 aaKnown RBP20.25■□□□□ 0.83
CSNK1E-203ENST00000396832 TRAV24A0A0B4J272 114 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 C11orf94C9JXX5 98 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 SIRPB1O00241 398 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 C3AR1Q16581 482 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 LYSMD4Q5XG99 296 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 TUSC5Q8IXB3 177 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 PRDM6Q9NQX0 595 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 PATE3B3GLJ2 98 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 CLDN1O95832 211 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 MPLP40238 635 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 FFAR4Q5NUL3 377 aa20.24■□□□□ 0.83
CSNK1E-203ENST00000396832 IL6RP08887 468 aaPredicted RBP20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 FOLR3P41439 243 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 SPINK9Q5DT21 86 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 OR2Y1Q8NGV0 311 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 HES7Q9BYE0 225 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 KNTC1P50748 2209 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 CXCL12P48061 93 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 TFPI2P48307 235 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 CEACAM21Q3KPI0 293 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 SPEM1Q8N4L4 309 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 SPSB4Q96A44 273 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 TPPP2P59282 170 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 FOXL1Q12952 345 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 TMEM183BQ1AE95 376 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 SGMS2Q8NHU3 365 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 BTF3L4Q96K17 158 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 STRADBQ9C0K7 418 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 PRDM14Q9GZV8 571 aa20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 PATZ1Q9HBE1 687 aaKnown RBP20.23■□□□□ 0.83
CSNK1E-203ENST00000396832 IGLV2-14P01704 120 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 CRYAAP02489 173 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 C1QTNF9P0C862 333 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 ZNF585BQ52M93 769 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 TMEM14EPQ6UXP3 125 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 TMEM9BQ9NQ34 198 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 ELOVL5Q9NYP7 299 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 K7ESF4 209 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 CD99P14209 185 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 CA6P23280 308 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 CD82P27701 267 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 CDKN1AP38936 164 aa20.22■□□□□ 0.83
CSNK1E-203ENST00000396832 SIAH2O43255 324 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 VN1R17PQ8TDU5 208 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 HSPB9Q9BQS6 159 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 VAMP8Q9BV40 100 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 TP53TG3Q9ULZ0 132 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 SPENQ96T58 3664 aaKnown RBP20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 TCF21O43680 179 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 PAFAH1B2P68402 229 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 ZXDAP98168 799 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 KCNE4Q8WWG9 221 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 HLA-CQ95604 372 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 ZDHHC11Q9H8X9 412 aa20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 RYDENQ9NUL5 291 aaKnown RBP20.21■□□□□ 0.83
CSNK1E-203ENST00000396832 PGPEP1LA6NFU8 196 aa20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 FAM166BA8MTA8 275 aa20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 COX5AP20674 150 aa20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 RANP62826 216 aaKnown RBP20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 ANKRD39Q53RE8 183 aa20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 DERL1Q9BUN8 251 aa20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 COLQQ9Y215 455 aaPredicted RBP20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 WNT2P09544 360 aa20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 GNB1P62873 340 aa20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 RIMS4Q9H426 269 aaPredicted RBP20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 DLL3Q9NYJ7 618 aa20.2■□□□□ 0.82
CSNK1E-203ENST00000396832 RIPPLY2Q5TAB7 128 aa20.19■□□□□ 0.82
CSNK1E-203ENST00000396832 NDUFB4O95168 129 aa20.19■□□□□ 0.82
CSNK1E-203ENST00000396832 TFF3Q07654 80 aa20.19■□□□□ 0.82
CSNK1E-203ENST00000396832 TRA2AQ13595 282 aaKnown RBP eCLIP20.19■□□□□ 0.82
CSNK1E-203ENST00000396832 ZNF114Q8NC26 417 aa20.19■□□□□ 0.82
CSNK1E-203ENST00000396832 OR5P3Q8WZ94 311 aa20.19■□□□□ 0.82
CSNK1E-203ENST00000396832 CEBPDP49716 269 aaPredicted RBP20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 LINC00310P59036 64 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 IL11RAQ14626 422 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 COL5A1-AS1Q5SY13 56 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 COLCA1Q6ZS62 124 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 UBE2G2P60604 165 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 NUFIP2Q7Z417 695 aaKnown RBP20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 FAM58AQ8N1B3 248 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 FGFRL1Q8N441 504 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 ZNF808Q8N4W9 903 aaPredicted RBP20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 TMEM147Q9BVK8 224 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 C12orf49Q9H741 205 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 TRAPPC2LQ9UL33 140 aa20.18■□□□□ 0.82
CSNK1E-203ENST00000396832 YPEL3P61236 119 aaPredicted RBP20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 ZNF816Q0VGE8 651 aaPredicted RBP20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 SAXO1Q8IYX7 474 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 SFRP2Q96HF1 295 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms