RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CSF1P09603 554 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 MDKP21741 143 aaPredicted RBP15.3■□□□□ 0.04
HOXA9-202ENST00000396345 ETV6P41212 452 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 THBS3P49746 956 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 COMPP49747 757 aaPredicted RBP15.3■□□□□ 0.04
HOXA9-202ENST00000396345 AWAT1Q58HT5 328 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 RNASE10Q5GAN6 216 aaKnown RBP15.3■□□□□ 0.04
HOXA9-202ENST00000396345 TMEM17Q86X19 198 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 OR8H1Q8NGG4 311 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 MOB3AQ96BX8 217 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 ADTRPQ96IZ2 230 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 TINAGL1Q9GZM7 467 aaPredicted RBP15.3■□□□□ 0.04
HOXA9-202ENST00000396345 CCL28Q9NRJ3 127 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 MMP24Q9Y5R2 645 aa15.3■□□□□ 0.04
HOXA9-202ENST00000396345 A0A1B0GUS0 222 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 CLPSL1A2RUU4 121 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 FGF16O43320 207 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 CD74P04233 296 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 AMY1AP04745 511 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 AMY2AP04746 511 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 DUTP33316 252 aaKnown RBP15.29■□□□□ 0.04
HOXA9-202ENST00000396345 TAGLNQ01995 201 aaKnown RBP15.29■□□□□ 0.04
HOXA9-202ENST00000396345 MSMO1Q15800 293 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 ABCA11PQ4W5N1 156 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 STEAP1BQ6NZ63 245 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 LINC01006Q8NI28 216 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 RITA1Q96K30 269 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 THAP7Q9BT49 309 aaPredicted RBP15.29■□□□□ 0.04
HOXA9-202ENST00000396345 ZNF702PQ9H963 129 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 PLSCR3Q9NRY6 295 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 SLC35D1Q9NTN3 355 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 TAS2R8Q9NYW2 309 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 TENM1Q9UKZ4 2725 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 STAB1Q9NY15 2570 aa15.29■□□□□ 0.04
HOXA9-202ENST00000396345 RAB3DO95716 219 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 F2RL1P55085 397 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 ZNF79Q15937 498 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 ARSJQ5FYB0 599 aaPredicted RBP15.28■□□□□ 0.04
HOXA9-202ENST00000396345 C11orf88Q6PI97 169 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 C12orf54Q6X4T0 127 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 PDPNQ86YL7 162 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 Q8N402 240 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 C5orf56Q8N8D9 126 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 ZBTB34Q8NCN2 500 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 OR2T6Q8NHC8 308 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 SIGLEC9Q9Y336 463 aa15.28■□□□□ 0.04
HOXA9-202ENST00000396345 SH2D7A6NKC9 451 aaPredicted RBP15.27■□□□□ 0.04
HOXA9-202ENST00000396345 LINC00473A8K010 186 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 CNTFRP26992 372 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 CBX3Q13185 183 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 MMDQ15546 238 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 RTL8BQ17RB0 113 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 C9orf152Q5JTZ5 239 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 Q6ZS46 218 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 Q8N2B8 174 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 ARRDC1Q8N5I2 433 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 BVESQ8NE79 360 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 OR4D10Q8NGI6 311 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 BORCS5Q969J3 196 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 HSD17B10Q99714 261 aaKnown RBP15.27■□□□□ 0.04
HOXA9-202ENST00000396345 FXYD6Q9H0Q3 95 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 RNF114Q9Y508 228 aa15.27■□□□□ 0.04
HOXA9-202ENST00000396345 ANKRD20A5PA0PJZ0 165 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 NBR2O15453 112 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 TNFSF12O43508 249 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 IGKV1-16P04430 117 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 AKAIN1P0CW23 69 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 RRASP10301 218 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 GNRHRP30968 328 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 RPS16P62249 146 aaKnown RBP15.26■□□□□ 0.03
HOXA9-202ENST00000396345 EIF4EBP1Q13541 118 aaPredicted RBP15.26■□□□□ 0.03
HOXA9-202ENST00000396345 MEF2DQ14814 521 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 ZNF66Q6ZN08 573 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 ZNF818PQ6ZRF7 136 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 KCTD9Q7L273 389 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 MFSD4AQ8N468 514 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 Q8N9W7 124 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 DDB2Q92466 427 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 FLYWCH2Q96CP2 140 aaKnown RBP15.26■□□□□ 0.03
HOXA9-202ENST00000396345 RNF5Q99942 180 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 RASL11BQ9BPW5 248 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 PRELID3BQ9Y3B1 194 aa15.26■□□□□ 0.03
HOXA9-202ENST00000396345 RPL30P62888 115 aaKnown RBP15.25■□□□□ 0.03
HOXA9-202ENST00000396345 FAM71E2Q8N5Q1 922 aa15.25■□□□□ 0.03
HOXA9-202ENST00000396345 NPBQ8NG41 125 aa15.25■□□□□ 0.03
HOXA9-202ENST00000396345 TCTEX1D2Q8WW35 142 aa15.25■□□□□ 0.03
HOXA9-202ENST00000396345 GPHA2Q96T91 129 aa15.25■□□□□ 0.03
HOXA9-202ENST00000396345 SRRQ9GZT4 340 aa15.25■□□□□ 0.03
HOXA9-202ENST00000396345 LIN7CQ9NUP9 197 aaKnown RBP15.25■□□□□ 0.03
HOXA9-202ENST00000396345 KIAA1456Q9P272 454 aa15.25■□□□□ 0.03
HOXA9-202ENST00000396345 DISC1C4P0D8 188 aa15.24■□□□□ 0.03
HOXA9-202ENST00000396345 PEX14O75381 377 aa15.24■□□□□ 0.03
HOXA9-202ENST00000396345 VDAC2P45880 294 aaPredicted RBP15.24■□□□□ 0.03
HOXA9-202ENST00000396345 AADACL3Q5VUY0 350 aa15.24■□□□□ 0.03
HOXA9-202ENST00000396345 FAAP20Q6NZ36 180 aa15.24■□□□□ 0.03
HOXA9-202ENST00000396345 LPCAT3Q6P1A2 487 aa15.24■□□□□ 0.03
HOXA9-202ENST00000396345 OR4C16Q8NGL9 310 aa15.24■□□□□ 0.03
HOXA9-202ENST00000396345 TRIM63Q969Q1 353 aa15.24■□□□□ 0.03
HOXA9-202ENST00000396345 TSNAXQ99598 290 aaKnown RBP15.24■□□□□ 0.03
HOXA9-202ENST00000396345 PTTG2Q9NZH5 202 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms