RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
PLXNA1-201ENST00000393409 SIGLEC14Q08ET2 396 aa11.31□□□□□ -0.6
PLXNA1-201ENST00000393409 MGAT2Q10469 447 aa11.31□□□□□ -0.6
PLXNA1-201ENST00000393409 ZPLD1Q8TCW7 415 aa11.31□□□□□ -0.6
PLXNA1-201ENST00000393409 FAM222BQ8WU58 562 aa11.31□□□□□ -0.6
PLXNA1-201ENST00000393409 RASL10BQ96S79 203 aa11.31□□□□□ -0.6
PLXNA1-201ENST00000393409 DIRC2Q96SL1 478 aa11.31□□□□□ -0.6
PLXNA1-201ENST00000393409 OR52M1Q8NGK5 317 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 HDHD3Q9BSH5 251 aaPredicted RBP11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 UCP3P55916 312 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 SAXO1Q8IYX7 474 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 WNT2BQ93097 391 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 MRPS16Q9Y3D3 137 aaKnown RBP11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 LAMTOR1Q6IAA8 161 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 SCNM1Q9BWG6 230 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 GPR35Q9HC97 309 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 MRPL52Q86TS9 123 aaKnown RBP11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 MRPL32Q9BYC8 188 aaKnown RBP11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 C1QL3Q5VWW1 255 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 SELENOHQ8IZQ5 122 aaKnown RBP11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 IL4P05112 153 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 HBBP68871 147 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 TMEM177Q53S58 311 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 MDKP21741 143 aaPredicted RBP11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 MAS1LP35410 378 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 MMD2Q8IY49 270 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 CLEC5AQ9NY25 188 aa11.3□□□□□ -0.6
PLXNA1-201ENST00000393409 SIPA1L1O43166 1804 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 MGPP08493 103 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 SERGEFQ9UGK8 458 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 OR2J1Q9GZK6 312 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 UPK3AO75631 287 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 BHLHA15Q7RTS1 189 aaPredicted RBP11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 GALNT14Q96FL9 552 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 MARS2Q96GW9 593 aaKnown RBP11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 A1L4Q6 167 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 OR2I1PQ8NGU4 316 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 PCOLCE2Q9UKZ9 415 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■□ 22.2
PLXNA1-201ENST00000393409 LYZL6O75951 148 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 WNT5AP41221 380 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 RIPPLY2Q5TAB7 128 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 FAM216AQ8WUB2 273 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 NUDT3O95989 172 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 EPHA8P29322 1005 aaPredicted RBP11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 ID1P41134 155 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 SFTPA2Q8IWL1 248 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 SFTPA1Q8IWL2 248 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 CCL17Q92583 94 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 SFXN3Q9BWM7 321 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 C19orf48Q6RUI8 117 aa11.29□□□□□ -0.6
PLXNA1-201ENST00000393409 ERGP11308 486 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 LRRC75BQ2VPJ9 315 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 WDR31Q8NA23 367 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 COL11A2P13942 1736 aaPredicted RBP11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 LTBP4Q8N2S1 1624 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 IGHMP01871 453 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 CIRBPQ14011 172 aaKnown RBP11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 TMEM208Q9BTX3 173 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 WDR54Q9H977 334 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 SPTBN2O15020 2390 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 DLL1O00548 723 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 DRD3P35462 400 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 NDUFAF3Q9BU61 184 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 A0A1W2PR80 420 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 LIFP15018 202 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 NEUROG1Q92886 237 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 MBD1Q9UIS9 605 aaPredicted RBP11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 HELZP42694 1942 aaKnown RBP11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 SLC17A3O00476 420 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 HOXA5P20719 270 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 PSG9Q00887 426 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 INO80CQ6PI98 192 aaPredicted RBP11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 PLXND1Q9Y4D7 1925 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 NPIPB13A6NJU9 1138 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 NPIPB4C9JG80 1138 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 GCM2O75603 506 aaPredicted RBP11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 HERPUD1Q15011 391 aa11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 TBL2Q9Y4P3 447 aaKnown RBP11.28□□□□□ -0.6
PLXNA1-201ENST00000393409 TMEM190Q8WZ59 177 aa11.27□□□□□ -0.6
PLXNA1-201ENST00000393409 MARCH11A6NNE9 402 aa11.27□□□□□ -0.6
PLXNA1-201ENST00000393409 SYT8Q8NBV8 401 aa11.27□□□□□ -0.6
PLXNA1-201ENST00000393409 RAB1CQ92928 201 aa11.27□□□□□ -0.6
PLXNA1-201ENST00000393409 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.6
PLXNA1-201ENST00000393409 TRIP6Q15654 476 aaKnown RBP11.27□□□□□ -0.6
PLXNA1-201ENST00000393409 C9orf40Q8IXQ3 194 aa11.27□□□□□ -0.6
PLXNA1-201ENST00000393409 OPN3Q9H1Y3 402 aaPredicted RBP11.27□□□□□ -0.6
PLXNA1-201ENST00000393409 TMEM187Q14656 261 aa11.27□□□□□ -0.61
PLXNA1-201ENST00000393409 INSIG2Q9Y5U4 225 aa11.27□□□□□ -0.61
PLXNA1-201ENST00000393409 MGAMO43451 1857 aa11.27□□□□□ -0.61
PLXNA1-201ENST00000393409 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.61
PLXNA1-201ENST00000393409 MT-CO3P00414 261 aa11.27□□□□□ -0.61
PLXNA1-201ENST00000393409 LINC00869P0C866 280 aa11.27□□□□□ -0.61
PLXNA1-201ENST00000393409 PPP1CCP36873 323 aaKnown RBP11.27□□□□□ -0.61
PLXNA1-201ENST00000393409 ZP1P60852 638 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms