RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 PTGDSP41222 190 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 SELENOTP62341 195 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 BSXQ3C1V8 233 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 RSG1Q9BU20 258 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 AKIRIN1Q9H9L7 192 aaPredicted RBP12.75□□□□□ -0.37
LRRK1-201ENST00000388948 PDE6DO43924 150 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 HOGA1Q86XE5 327 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 EMP1P54849 157 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 LURAP1Q96LR2 239 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 DOCK6Q96HP0 2047 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 CECR9P0C854 216 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 SUCLG1P53597 346 aaKnown RBP12.75□□□□□ -0.37
LRRK1-201ENST00000388948 CFHR1Q03591 330 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
LRRK1-201ENST00000388948 GLIPR1P48060 266 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 MEGF10Q96KG7 1140 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 NPFFR1Q9GZQ6 430 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 GSX1Q9H4S2 264 aaPredicted RBP12.74□□□□□ -0.37
LRRK1-201ENST00000388948 HERPUD1Q15011 391 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 MRPL30Q8TCC3 161 aaKnown RBP12.74□□□□□ -0.37
LRRK1-201ENST00000388948 CHAC2Q8WUX2 184 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 SCMH1Q96GD3 660 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 WDFY2Q96P53 400 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 PXMP4Q9Y6I8 212 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 NBASA2RRP1 2371 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 IGHV3OR16-13A0A075B7E8 117 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 IGHV3-74A0A0B4J1X5 117 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 ISLRO14498 428 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 ACAA1P09110 424 aaPredicted RBP12.74□□□□□ -0.37
LRRK1-201ENST00000388948 COX5BP10606 129 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
LRRK1-201ENST00000388948 ZXDCQ2QGD7 858 aaPredicted RBP12.74□□□□□ -0.37
LRRK1-201ENST00000388948 TOLLIPQ9H0E2 274 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 UQCC3Q6UW78 93 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 WNT5BQ9H1J7 359 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 VAX2Q9UIW0 290 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 A0A0G2JLM5 398 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 ZG16O60844 167 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 NEURL2Q9BR09 285 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 GP6Q9HCN6 339 aa12.74□□□□□ -0.37
LRRK1-201ENST00000388948 ZNF253O75346 499 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 CEBPEQ15744 281 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 FAM74A4Q5TZK3 123 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 PGA5P0DJD9 388 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 MUC1P15941 1255 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 TEX261Q6UWH6 196 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 DPM3Q9P2X0 92 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 LHFPL6Q9Y693 200 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 KIF13BQ9NQT8 1826 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 RAG2P55895 527 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 EIF4EBP2Q13542 120 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 PDCD11Q14690 1871 aaKnown RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 PHOX2AO14813 284 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 RCC1P18754 421 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 VDAC2P45880 294 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 EFNB2P52799 333 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 NANOS3P60323 173 aaKnown RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 PRSS27Q9BQR3 290 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 IGHV3-23P01764 117 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 C11orf44Q8N8P7 122 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 ZNF430Q9H8G1 570 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 HSPB7Q9UBY9 170 aa12.73□□□□□ -0.37
LRRK1-201ENST00000388948 SCARF2Q96GP6 870 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 GPX7Q96SL4 187 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-201ENST00000388948 CHD5Q8TDI0 1954 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 IGKV1D-33P01593 117 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 IGKV1-33P01594 117 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 CX3CL1P78423 397 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 IGHV3-49A0A0A0MS15 119 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 A0A1W2PP11 408 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 CTDSPLO15194 276 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 GCSHP23434 173 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 HIST1H1AQ02539 215 aaPredicted RBP12.72□□□□□ -0.37
LRRK1-201ENST00000388948 PMS2P11Q13670 270 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 C10orf111Q8N326 155 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 ANAPC16Q96DE5 110 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 JPT1Q9UK76 154 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
LRRK1-201ENST00000388948 WDR25Q64LD2 544 aaPredicted RBP12.72□□□□□ -0.37
LRRK1-201ENST00000388948 ZNF502Q8TBZ5 544 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 NSUN5P1Q3KNT7 163 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 LHFPL5Q8TAF8 219 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 NPIPB8E9PQR5 432 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 SLC16A13Q7RTY0 426 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 LRP11Q86VZ4 500 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 CBLN4Q9NTU7 201 aa12.72□□□□□ -0.37
LRRK1-201ENST00000388948 AURKAIP1Q9NWT8 199 aaPredicted RBP12.72□□□□□ -0.37
LRRK1-201ENST00000388948 LSM10Q969L4 123 aaKnown RBP12.72□□□□□ -0.37
LRRK1-201ENST00000388948 ZNF107Q9UII5 783 aaPredicted RBP12.72□□□□□ -0.37
LRRK1-201ENST00000388948 CTXND1A0A1B0GTU2 59 aa12.71□□□□□ -0.37
LRRK1-201ENST00000388948 IGHV3-48P01763 117 aa12.71□□□□□ -0.37
LRRK1-201ENST00000388948 PSG9Q00887 426 aa12.71□□□□□ -0.37
LRRK1-201ENST00000388948 VKORC1L1Q8N0U8 176 aa12.71□□□□□ -0.37
LRRK1-201ENST00000388948 CHCHD2Q9Y6H1 151 aaPredicted RBP12.71□□□□□ -0.37
LRRK1-201ENST00000388948 TRAV34A0A0B4J273 112 aa12.71□□□□□ -0.37
LRRK1-201ENST00000388948 RNASE1P07998 156 aaKnown RBP12.71□□□□□ -0.37
LRRK1-201ENST00000388948 ZNF56Q15929 161 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms