RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 EIF5AL1Q6IS14 154 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 ZNF295-AS1Q8N0V1 137 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 LRRC20Q8TCA0 184 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 GAB2Q9UQC2 676 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 DVL1O14640 695 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 TOR2AQ5JU69 321 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 TMEM200BQ69YZ2 307 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 ZNF439Q8NDP4 499 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 CD300LFQ8TDQ1 290 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 H1FXQ92522 213 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 RAB40CQ96S21 281 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 RPUSD1Q9UJJ7 312 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 LAMP3Q9UQV4 416 aa16.35■□□□□ 0.21
PDLIM5-205ENST00000380180 HRNRQ86YZ3 2850 aaPredicted RBP16.34■□□□□ 0.21
PDLIM5-205ENST00000380180 BORCS7-ASMTA0A0B4J1R7 106 aa16.34■□□□□ 0.21
PDLIM5-205ENST00000380180 PPOXP50336 477 aa16.34■□□□□ 0.21
PDLIM5-205ENST00000380180 ITLN2Q8WWU7 325 aaPredicted RBP16.34■□□□□ 0.21
PDLIM5-205ENST00000380180 ARV1Q9H2C2 271 aa16.34■□□□□ 0.21
PDLIM5-205ENST00000380180 TOR1AO14656 332 aa16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 NDUFA2O43678 99 aa16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 FCGR3BO75015 233 aa16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 CST7O76096 145 aa16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 CCL3L1P16619 93 aa16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 GNG10P50151 68 aa16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 RPL23AP62750 156 aaKnown RBP16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 TMEM30BQ3MIR4 351 aa16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 GAL3ST2Q9H3Q3 398 aa16.33■□□□□ 0.21
PDLIM5-205ENST00000380180 SAA2-SAA4A0A096LPE2 208 aa16.33■□□□□ 0.2
PDLIM5-205ENST00000380180 RAB29O14966 203 aa16.33■□□□□ 0.2
PDLIM5-205ENST00000380180 SAA2P0DJI9 122 aaPredicted RBP16.33■□□□□ 0.2
PDLIM5-205ENST00000380180 MIDNQ504T8 468 aa16.33■□□□□ 0.2
PDLIM5-205ENST00000380180 LYG1Q8N1E2 194 aa16.33■□□□□ 0.2
PDLIM5-205ENST00000380180 ZNF714Q96N38 554 aa16.33■□□□□ 0.2
PDLIM5-205ENST00000380180 PLA2G2EQ9NZK7 142 aa16.33■□□□□ 0.2
PDLIM5-205ENST00000380180 WSB1Q9Y6I7 421 aa16.33■□□□□ 0.2
PDLIM5-205ENST00000380180 H3BP45 60 aa16.32■□□□□ 0.2
PDLIM5-205ENST00000380180 CLINT1Q14677 625 aa16.32■□□□□ 0.2
PDLIM5-205ENST00000380180 H2BFWTQ7Z2G1 175 aa16.32■□□□□ 0.2
PDLIM5-205ENST00000380180 ZNF251Q9BRH9 671 aa16.32■□□□□ 0.2
PDLIM5-205ENST00000380180 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.32■□□□□ 0.2
PDLIM5-205ENST00000380180 CBLN4Q9NTU7 201 aa16.32■□□□□ 0.2
PDLIM5-205ENST00000380180 MARCH11A6NNE9 402 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 FAM90A26D6RGX4 464 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 HPRT1P00492 218 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 IAPPP10997 89 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 MRPS11P82912 194 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 BAXQ07812 192 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 HEPN1Q6WQI6 88 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 TMEM217Q8N7C4 229 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 OR10A7Q8NGE5 316 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 OR1S2Q8NGQ3 325 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 OR5C1Q8NGR4 320 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 R3HDM4Q96D70 268 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 GINS3Q9BRX5 216 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 TET2Q6N021 2002 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 DCHS2Q6V1P9 2916 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 ZNF705EA8MWA4 302 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 TXNL1O43396 289 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 FGF2P09038 288 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 DYNLT3P51808 116 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 UBE2KP61086 200 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 TNFRSF9Q07011 255 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 SLC25A48Q6ZT89 311 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 HSD17B13Q7Z5P4 300 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 DDB2Q92466 427 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 S1PR3Q99500 378 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 PSENENQ9NZ42 101 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 LPAR3Q9UBY5 353 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 PRELID3BQ9Y3B1 194 aa16.31■□□□□ 0.2
PDLIM5-205ENST00000380180 SMIM8Q96KF7 97 aa16.3■□□□□ 0.2
PDLIM5-205ENST00000380180 HSPB7Q9UBY9 170 aa16.3■□□□□ 0.2
PDLIM5-205ENST00000380180 RBFOX2O43251 390 aaKnown RBP eCLIP16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 DAOP14920 347 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 AGAP20933 346 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 SULT1A2P50226 295 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 EIF4E3Q8N5X7 224 aaKnown RBP16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 MARVELD3Q96A59 401 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 RAB1BQ9H0U4 201 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 RBKSQ9H477 322 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 IGSF10Q6WRI0 2623 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 A8MXK9 166 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 SOD3P08294 240 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 SEC11BP0C7V7 166 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 C11orf71Q6IPW1 123 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 HSD17B11Q8NBQ5 300 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 ZNRD1Q9P1U0 126 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 SESN1Q9Y6P5 492 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 MALRD1Q5VYJ5 2156 aa16.29■□□□□ 0.2
PDLIM5-205ENST00000380180 SPP1P10451 314 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 SULT1A1P50225 295 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 TMEM267Q0VDI3 215 aaPredicted RBP16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 ZNF266Q14584 549 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 STX12Q86Y82 276 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 SAT2Q96F10 170 aaPredicted RBP16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 CACNA1BQ00975 2339 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 LY6HO94772 140 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 IGHV2-70P01814 119 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 KIR2DS2P43631 304 aa16.28■□□□□ 0.2
PDLIM5-205ENST00000380180 TAS2R30P59541 319 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms