RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 OR10P1Q8NGE3 313 aa6.21□□□□□ -1.42
TRIM6-202ENST00000380097 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.21□□□□□ -1.42
TRIM6-202ENST00000380097 KCNE4Q8WWG9 221 aa6.21□□□□□ -1.42
TRIM6-202ENST00000380097 FAM131CQ96AQ9 280 aa6.21□□□□□ -1.42
TRIM6-202ENST00000380097 LRFN3Q9BTN0 628 aa6.21□□□□□ -1.42
TRIM6-202ENST00000380097 DERL1Q9BUN8 251 aa6.21□□□□□ -1.42
TRIM6-202ENST00000380097 MEGF9Q9H1U4 602 aa6.21□□□□□ -1.42
TRIM6-202ENST00000380097 MRPS16Q9Y3D3 137 aaKnown RBP6.21□□□□□ -1.42
TRIM6-202ENST00000380097 CFIP05156 583 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 CD38P28907 300 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 COMPP49747 757 aaPredicted RBP6.2□□□□□ -1.42
TRIM6-202ENST00000380097 RBM11P57052 281 aaKnown RBP6.2□□□□□ -1.42
TRIM6-202ENST00000380097 RPS16P62249 146 aaKnown RBP6.2□□□□□ -1.42
TRIM6-202ENST00000380097 KIAA1644Q3SXP7 199 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 SAXO1Q8IYX7 474 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 GMPPAQ96IJ6 420 aaPredicted RBP6.2□□□□□ -1.42
TRIM6-202ENST00000380097 OXGR1Q96P68 337 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 TP53TG3Q9ULZ0 132 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 TIMM9Q9Y5J7 89 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 SLC17A3O00476 420 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 PSG1P11464 419 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 EPHA8P29322 1005 aaPredicted RBP6.2□□□□□ -1.42
TRIM6-202ENST00000380097 ATP5G3P48201 142 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 GNB1P62873 340 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 MRPS21P82921 87 aaKnown RBP6.2□□□□□ -1.42
TRIM6-202ENST00000380097 SCGB2A2Q13296 93 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 PMCHL1Q16048 86 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 PHYHD1Q5SRE7 291 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 FAM69BQ5VUD6 431 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 NIT1Q86X76 327 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 SLC22A18ASQ8N1D0 253 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 OR2M3Q8NG83 312 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 OR5B3Q8NH48 314 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 TMEM147Q9BVK8 224 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 QTRT1Q9BXR0 403 aaKnown RBP6.2□□□□□ -1.42
TRIM6-202ENST00000380097 GNB4Q9HAV0 340 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 ERRFI1Q9UJM3 462 aaPredicted RBP6.2□□□□□ -1.42
TRIM6-202ENST00000380097 PPP1R3CQ9UQK1 317 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 SIT1Q9Y3P8 196 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 NBASA2RRP1 2371 aa6.2□□□□□ -1.42
TRIM6-202ENST00000380097 IGKV1-27A0A075B6S5 117 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 IGKV1-12A0A0C4DH73 117 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 IGHV1-69-2A0A0G2JMI3 117 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 MLNRO43193 412 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 MMP23AO75900 390 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 IGKV1D-12P01611 117 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 WNT2P09544 360 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 ESDP10768 282 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 DEFA4P12838 97 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 CTSSP25774 331 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 OTX2P32243 289 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 PLA2G5P39877 138 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 FUT6P51993 359 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 Q0VG73 95 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 Q6ZRM9 215 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 APOBEC3DQ96AK3 386 aaPredicted RBP6.19□□□□□ -1.42
TRIM6-202ENST00000380097 TMEM204Q9BSN7 226 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 MRPS17Q9Y2R5 130 aaKnown RBP6.19□□□□□ -1.42
TRIM6-202ENST00000380097 WASHC3Q9Y3C0 194 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 PI4KAP42356 2102 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 FREM2Q5SZK8 3169 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 PCNX3Q9H6A9 2034 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 IGHV3-20A0A0C4DH32 117 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 RAB29O14966 203 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 DEGS1O15121 323 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 RBFOX2O43251 390 aaKnown RBP eCLIP6.19□□□□□ -1.42
TRIM6-202ENST00000380097 S1PR2O95136 353 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 C3orf79P0CE67 100 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 SLC25A6P12236 298 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 CTRLP40313 264 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 CAPZBP47756 277 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 RPEL1Q2QD12 228 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 MORN2Q502X0 79 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 Q56UQ5 140 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 VWA1Q6PCB0 445 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 HAPLN4Q86UW8 402 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 FAM19A2Q8N3H0 131 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 ZNF611Q8N823 705 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 ST6GALNAC3Q8NDV1 305 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 METTL7AQ9H8H3 244 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 GPR27Q9NS67 375 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 IL36BQ9NZH7 164 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 WNT16Q9UBV4 365 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 DOCK11Q5JSL3 2073 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 NPIPA3F8WFD2 350 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 SIRPB1O00241 398 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 TMPRSS2O15393 492 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 HSBP1O75506 76 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 NPPCP23582 126 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 TIMP3P35625 211 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 DUSP3P51452 185 aaPredicted RBP6.19□□□□□ -1.42
TRIM6-202ENST00000380097 PRRX1P54821 245 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 KRTCAP3Q53RY4 240 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 OR8I2Q8N0Y5 310 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 PNKDQ8N490 385 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 ZNF114Q8NC26 417 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 OR5P3Q8WZ94 311 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 ZNF501Q96CX3 271 aaPredicted RBP6.19□□□□□ -1.42
TRIM6-202ENST00000380097 KCNS1Q96KK3 526 aa6.19□□□□□ -1.42
TRIM6-202ENST00000380097 KCNIP2Q9NS61 270 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms