RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 TPRX1Q8N7U7 411 aa8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 SNRNP40Q96DI7 357 aaKnown RBP8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 MS4A7Q9GZW8 240 aaPredicted RBP8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 HIPK2Q9H2X6 1198 aa8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 ZNF665Q9H7R5 613 aa8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 GCM1Q9NP62 436 aa8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 GNG12Q9UBI6 72 aa8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 HSPB7Q9UBY9 170 aa8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 KPTNQ9Y664 436 aa8.71□□□□□ -1.02
POLR2J3-201ENST00000379340 KIAA2026Q5HYC2 2103 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 IGHV3OR15-7A0A075B7D8 119 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 RBFOX2O43251 390 aaKnown RBP eCLIP8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 NXPH3O95157 252 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 TFF1P04155 84 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 ADCYAP1P18509 176 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 CD80P33681 288 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 UBE2KP61086 200 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 RPL30P62888 115 aaKnown RBP8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 SRSF3P84103 164 aaKnown RBP8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 AKR1C1Q04828 323 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 TNFRSF9Q07011 255 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 KLRB1Q12918 225 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 MORN2Q502X0 79 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 ZNF808Q8N4W9 903 aaPredicted RBP8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 RND1Q92730 232 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 VKORC1Q9BQB6 163 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 AGMATQ9BSE5 352 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 SH3BGRL3Q9H299 93 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 CALYQ9NYX4 217 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 PSG11Q9UQ72 335 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 SVILO95425 2214 aa8.7□□□□□ -1.02
POLR2J3-201ENST00000379340 TRGV10A0A0A0MS01 117 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 IGHV3-43A0A0B4J1X8 118 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 LRRC30A6NM36 301 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ZNF729A6NN14 1252 aaPredicted RBP8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 C17orf98A8MV24 154 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 S1PR2O95136 353 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 HBE1P02100 147 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 SFTA3P0C7M3 94 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 CGB3P0DN86 165 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 CGB7P0DN87 165 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 IGHV3-43DP0DP04 118 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ASCL1P50553 236 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 EDDM3BP56851 147 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 RAB2AP61019 212 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 HOXA4Q00056 320 aaPredicted RBP8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ZNF816Q0VGE8 651 aaPredicted RBP8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 GUK1Q16774 197 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ATP6V1FQ16864 119 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 Q3ZCU0 254 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 AKR1C8PQ5T2L2 129 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 SLC25A24Q6NUK1 477 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ATRAIDQ6UW56 229 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 H2BFWTQ7Z2G1 175 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 TMEM217Q8N7C4 229 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 RFESDQ8TAC1 157 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 SCGB1C1Q8TD33 95 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 PSMG3Q9BT73 122 aaPredicted RBP8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 KCNJ16Q9NPI9 418 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 COQ3Q9NZJ6 369 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 DPRXA6NFQ7 191 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 NKX6-3A6NJ46 265 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 C17orf100A8MU93 164 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 DNASE2O00115 360 aaPredicted RBP8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 RAMP3O60896 148 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 HPRT1P00492 218 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 THBDP07204 575 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 IAPPP10997 89 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 DUTP33316 252 aaKnown RBP8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 CASP6P55212 293 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 RIPPLY3P57055 190 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 LOXL3P58215 753 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 TLE4Q04727 773 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 TMEM267Q0VDI3 215 aaPredicted RBP8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ADIPOQQ15848 244 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 SPRNQ5BIV9 151 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 BTNL3Q6UXE8 466 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 TMEM14EPQ6UXP3 125 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ZNF788Q6ZQV5 615 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 C22orf34Q6ZV56 151 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 C1orf87Q8N0U7 546 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 PUSL1Q8N0Z8 303 aaKnown RBP8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 ZNRF1Q8ND25 227 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 CORO2AQ92828 525 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 GAFA1Q96PS6 74 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 DCTN5Q9BTE1 182 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 EGLN1Q9GZT9 426 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 RBKSQ9H477 322 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 TMEM231Q9H6L2 316 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 GFOD1Q9NXC2 390 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 PRELID3BQ9Y3B1 194 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 FAM96BQ9Y3D0 163 aa8.69□□□□□ -1.02
POLR2J3-201ENST00000379340 PRR14LQ5THK1 2151 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms