RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 IGKV1-16P04430 117 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 CLEC2LP0C7M8 214 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
HMGN4-201ENST00000377575 TAGLNQ01995 201 aaKnown RBP13.16□□□□□ -0.3
HMGN4-201ENST00000377575 ECSCRQ19T08 205 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 H1FOOQ8IZA3 346 aaPredicted RBP13.16□□□□□ -0.3
HMGN4-201ENST00000377575 TCTEX1D1Q8N7M0 179 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 ABHD5Q8WTS1 349 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 NUDCD2Q8WVJ2 157 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 DPF1Q92782 380 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 FLYWCH2Q96CP2 140 aaKnown RBP13.16□□□□□ -0.3
HMGN4-201ENST00000377575 P2RX4Q99571 388 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 SLC35D1Q9NTN3 355 aa13.16□□□□□ -0.3
HMGN4-201ENST00000377575 METTL1Q9UBP6 276 aaKnown RBP13.16□□□□□ -0.3
HMGN4-201ENST00000377575 A0A0A6YYH2 397 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 A6NJ64 397 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 CCL24O00175 119 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 CTXN2P0C2S0 81 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 PPIFP30405 207 aaKnown RBP13.15□□□□□ -0.3
HMGN4-201ENST00000377575 CRIP2P52943 208 aaPredicted RBP13.15□□□□□ -0.3
HMGN4-201ENST00000377575 NDPQ00604 133 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 PSG5Q15238 335 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 ZNF260Q3ZCT1 412 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 CROCCP3Q8IVE0 287 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 RAX2Q96IS3 184 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 ST6GALNAC5Q9BVH7 336 aa13.15□□□□□ -0.3
HMGN4-201ENST00000377575 AURKAIP1Q9NWT8 199 aaPredicted RBP13.15□□□□□ -0.3
HMGN4-201ENST00000377575 IGKV1D-8A0A087WSZ0 117 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 AIREO43918 545 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 IGLV1-40P01703 118 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 RAB25P57735 213 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 CX3CL1P78423 397 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 TMEM267Q0VDI3 215 aaPredicted RBP13.14□□□□□ -0.31
HMGN4-201ENST00000377575 RTL8BQ17RB0 113 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 DEFB136Q30KP8 78 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 OR5H6Q8NGV6 325 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 MRAPQ8TCY5 172 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 MYOZ3Q8TDC0 251 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 SLC25A38Q96DW6 304 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 ADTRPQ96IZ2 230 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 DUX3Q96PT4 197 aa13.14□□□□□ -0.31
HMGN4-201ENST00000377575 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
HMGN4-201ENST00000377575 CA2P00918 260 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 RRASP10301 218 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 LINC00205P59089 165 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 PYHIN1Q6K0P9 492 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 CNIH2Q6PI25 160 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 YIPF6Q96EC8 236 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 UBE2E2Q96LR5 201 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 HARBI1Q96MB7 349 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 CLCC1Q96S66 551 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 SPATA2Q9UM82 520 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 VSIG4Q9Y279 399 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 FBXO7Q9Y3I1 522 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 A3GALT2U3KPV4 340 aa13.13□□□□□ -0.31
HMGN4-201ENST00000377575 A0A1W2PN81 502 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 FCN1O00602 326 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 SLC25A17O43808 307 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 CHRNA7P36544 502 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 LGALS7P47929 136 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 ZNF562Q6V9R5 426 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 PPP1R27Q86WC6 154 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 ZNF645Q8N7E2 425 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 ZNF491Q8N8L2 437 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 C5orf30Q96GV9 206 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 DIABLOQ9NR28 239 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 ANXA10Q9UJ72 324 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 OR2W1Q9Y3N9 320 aa13.12□□□□□ -0.31
HMGN4-201ENST00000377575 TRAV18A0A075B6X5 111 aa13.11□□□□□ -0.31
HMGN4-201ENST00000377575 SHOXO15266 292 aa13.11□□□□□ -0.31
HMGN4-201ENST00000377575 SSX5O60225 188 aa13.11□□□□□ -0.31
HMGN4-201ENST00000377575 SLC22A5O76082 557 aa13.11□□□□□ -0.31
HMGN4-201ENST00000377575 RAB9AP51151 201 aa13.11□□□□□ -0.31
HMGN4-201ENST00000377575 LUMP51884 338 aaPredicted RBP13.11□□□□□ -0.31
HMGN4-201ENST00000377575 ARPC4P59998 168 aa13.11□□□□□ -0.31
HMGN4-201ENST00000377575 ACTBL2Q562R1 376 aa13.11□□□□□ -0.31
HMGN4-201ENST00000377575 KLK15Q9H2R5 256 aa13.11□□□□□ -0.31
HMGN4-201ENST00000377575 OR8U8P0C7N1 319 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 NFYAP23511 347 aaPredicted RBP13.1□□□□□ -0.31
HMGN4-201ENST00000377575 CD40LGP29965 261 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 DUTP33316 252 aaKnown RBP13.1□□□□□ -0.31
HMGN4-201ENST00000377575 RUNX1Q01196 453 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 EGFEM1PQ0D2K5 195 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 FHL3Q13643 280 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 AKIRIN2Q53H80 203 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 TMEM177Q53S58 311 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 UBE2NLQ5JXB2 153 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 UNQ5815/PRO19632Q6UWF5 114 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 BVESQ8NE79 360 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 OR11H1Q8NG94 326 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
HMGN4-201ENST00000377575 GNB4Q9HAV0 340 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 TPSG1Q9NRR2 321 aa13.1□□□□□ -0.31
HMGN4-201ENST00000377575 ZMAT5Q9UDW3 170 aaKnown RBP13.1□□□□□ -0.31
HMGN4-201ENST00000377575 NUBP2Q9Y5Y2 271 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms