RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NCR3LG1Q68D85 454 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 GPR61Q9BZJ8 451 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 DMRT1Q9Y5R6 373 aa21.17■□□□□ 0.98
C9orf40-201ENST00000376854 CACNA1HO95180 2353 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 OR5H1A6NKK0 313 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 RAB29O14966 203 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 MBP02144 154 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 RPS16P62249 146 aaKnown RBP21.16■□□□□ 0.98
C9orf40-201ENST00000376854 TMEM241Q24JQ0 296 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 C4orf17Q53FE4 359 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 CYP2G1PQ6ZSU1 146 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 H2BFWTQ7Z2G1 175 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 RBMXL2O75526 392 aaKnown RBP21.16■□□□□ 0.98
C9orf40-201ENST00000376854 SSTR5P35346 364 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 TRIP6Q15654 476 aaKnown RBP21.16■□□□□ 0.98
C9orf40-201ENST00000376854 FFAR4Q5NUL3 377 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 TPRX1Q8N7U7 411 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 CNEP1R1Q8N9A8 125 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 RPUSD4Q96CM3 377 aaKnown RBP21.16■□□□□ 0.98
C9orf40-201ENST00000376854 UFSP2Q9NUQ7 469 aa21.16■□□□□ 0.98
C9orf40-201ENST00000376854 KBTBD11O94819 623 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 TNFSF10P50591 281 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 TFF3Q07654 80 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 WDR82Q6UXN9 313 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 PRR7Q8TB68 274 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 CIB3Q96Q77 187 aaPredicted RBP21.15■□□□□ 0.98
C9orf40-201ENST00000376854 MRPL37Q9BZE1 423 aaKnown RBP21.15■□□□□ 0.98
C9orf40-201ENST00000376854 DSPP15924 2871 aaKnown RBP21.15■□□□□ 0.98
C9orf40-201ENST00000376854 TRBV23-1A0A0A0MS06 115 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 IGHV3-43A0A0B4J1X8 118 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 PTBP3O95758 552 aaKnown RBP21.15■□□□□ 0.98
C9orf40-201ENST00000376854 IGHV3-43DP0DP04 118 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 HOXC12P31275 282 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 TAAR6Q96RI8 345 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 METRNQ9UJH8 293 aa21.15■□□□□ 0.98
C9orf40-201ENST00000376854 TIMM8AO60220 97 aaPredicted RBP21.14■□□□□ 0.97
C9orf40-201ENST00000376854 COL10A1Q03692 680 aa21.14■□□□□ 0.97
C9orf40-201ENST00000376854 SPINK9Q5DT21 86 aa21.14■□□□□ 0.97
C9orf40-201ENST00000376854 TCTEX1D1Q8N7M0 179 aa21.14■□□□□ 0.97
C9orf40-201ENST00000376854 OR13A1Q8NGR1 328 aa21.14■□□□□ 0.97
C9orf40-201ENST00000376854 FZR1Q9UM11 496 aa21.14■□□□□ 0.97
C9orf40-201ENST00000376854 TMEM250H0YL14 139 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 PHOX2AO14813 284 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 NKX2-8O15522 239 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 IGKV3-15P01624 115 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 RD3LP0DJH9 198 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 COX5AP20674 150 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 LINC00205P59089 165 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 NPCDR1Q9BY65 106 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 ACTR3CQ9C0K3 210 aaPredicted RBP21.13■□□□□ 0.97
C9orf40-201ENST00000376854 GTF3C1Q12789 2109 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 LINC00473A8K010 186 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 SOX8P57073 446 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 Q3ZCU0 254 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 CDPF1Q6NVV7 123 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 C16orf82Q7Z2V1 217 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 RFESDQ8TAC1 157 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 GATAD1Q8WUU5 269 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 LAMP3Q9UQV4 416 aa21.13■□□□□ 0.97
C9orf40-201ENST00000376854 DEFB108AA8MXU0 73 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 BSXQ3C1V8 233 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 ZNF66Q6ZN08 573 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 ZNF709Q8N972 641 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 WDR31Q8NA23 367 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 MANBALQ9NQG1 85 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 PSG11Q9UQ72 335 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 ST8SIA5O15466 376 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 MDKP21741 143 aaPredicted RBP21.12■□□□□ 0.97
C9orf40-201ENST00000376854 ZNF383Q8NA42 475 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 OR10A7Q8NGE5 316 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 OR4F5Q8NH21 305 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 LURAP1Q96LR2 239 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 OR4F4Q96R69 305 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 PARLQ9H300 379 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 MSL2Q9HCI7 577 aa21.12■□□□□ 0.97
C9orf40-201ENST00000376854 ZNF891A8MT65 544 aaPredicted RBP21.11■□□□□ 0.97
C9orf40-201ENST00000376854 FABP6P51161 128 aa21.11■□□□□ 0.97
C9orf40-201ENST00000376854 RPL23P62829 140 aaKnown RBP21.11■□□□□ 0.97
C9orf40-201ENST00000376854 GUSBP1Q15486 140 aa21.11■□□□□ 0.97
C9orf40-201ENST00000376854 VWC2Q2TAL6 325 aa21.11■□□□□ 0.97
C9orf40-201ENST00000376854 RAB24Q969Q5 203 aa21.11■□□□□ 0.97
C9orf40-201ENST00000376854 HSD17B10Q99714 261 aaKnown RBP21.11■□□□□ 0.97
C9orf40-201ENST00000376854 DIDO1Q9BTC0 2240 aaKnown RBP21.11■□□□□ 0.97
C9orf40-201ENST00000376854 EP300Q09472 2414 aaPredicted RBP21.11■□□□□ 0.97
C9orf40-201ENST00000376854 SMIM21Q3B7S5 101 aa21.11■□□□□ 0.97
C9orf40-201ENST00000376854 MARCH11A6NNE9 402 aa21.1■□□□□ 0.97
C9orf40-201ENST00000376854 IFNL4K9M1U5 179 aa21.1■□□□□ 0.97
C9orf40-201ENST00000376854 IGHG3P01860 377 aa21.1■□□□□ 0.97
C9orf40-201ENST00000376854 CCL11P51671 97 aa21.1■□□□□ 0.97
C9orf40-201ENST00000376854 NECAP1Q8NC96 275 aa21.1■□□□□ 0.97
C9orf40-201ENST00000376854 SNX22Q96L94 193 aa21.1■□□□□ 0.97
C9orf40-201ENST00000376854 PFN1P07737 140 aaKnown RBP21.1■□□□□ 0.97
C9orf40-201ENST00000376854 FABP4P15090 132 aa21.1■□□□□ 0.97
C9orf40-201ENST00000376854 VWA1Q6PCB0 445 aa21.1■□□□□ 0.97
C9orf40-201ENST00000376854 KITLGP21583 273 aa21.09■□□□□ 0.97
C9orf40-201ENST00000376854 KIR2DL2P43627 348 aaPredicted RBP21.09■□□□□ 0.97
C9orf40-201ENST00000376854 GNB2P62879 340 aa21.09■□□□□ 0.97
C9orf40-201ENST00000376854 WASF3Q9UPY6 502 aa21.09■□□□□ 0.97
C9orf40-201ENST00000376854 C17orf112F2Z3M2 114 aa21.09■□□□□ 0.97
C9orf40-201ENST00000376854 SPINT2O43291 252 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms